FFCP PHASE1:Hg19::chr15:45671019..45671033,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2628 | |EntrezGene=2628 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4175 | |HGNC=4175 | ||
|TSSclassifier=strong | |||
|UniProt=P50440 | |UniProt=P50440 | ||
|association_with_transcript=-28bp_to_ENST00000396659_5end | |association_with_transcript=-28bp_to_ENST00000396659_5end | ||
|cluster_id=chr15:45671019..45671033,- | |||
|coexpression_cluster_id=C189 | |coexpression_cluster_id=C189 | ||
|description=CAGE_peak_7_at_GATM_5end | |description=CAGE_peak_7_at_GATM_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.56e-19!24;CL:0000826!1.56e-19!24;CL:0000838!8.63e-14!52;CL:0000542!1.96e-13!53;CL:0000051!1.96e-13!53;CL:0000236!1.60e-11!14;CL:0002031!4.94e-10!124;CL:0002087!1.02e-09!119;CL:0000738!7.53e-09!140;CL:0000037!3.57e-07!172;CL:0000566!3.57e-07!172 | |ontology_enrichment_celltype=CL:0000945!1.56e-19!24;CL:0000826!1.56e-19!24;CL:0000838!8.63e-14!52;CL:0000542!1.96e-13!53;CL:0000051!1.96e-13!53;CL:0000236!1.60e-11!14;CL:0002031!4.94e-10!124;CL:0002087!1.02e-09!119;CL:0000738!7.53e-09!140;CL:0000037!3.57e-07!172;CL:0000566!3.57e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.07e-36;24!CL:0000236;1.89e-34;13!CL:0000542;2.06e-12;53!CL:0001014;2.85e-10;2!CL:0001016;2.85e-10;2 | |ontology_enrichment_celltype_v019=CL:0000945;2.07e-36;24!CL:0000236;1.89e-34;13!CL:0000542;2.06e-12;53!CL:0001014;2.85e-10;2!CL:0001016;2.85e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.07e-36,24;CL:0000826,2.07e-36,24;CL:0000236,5.38e-32,14;CL:0000838,1.04e-16,52;CL:0000542,2.17e-16,53;CL:0000051,2.17e-16,53;CL:0002031,1.71e-11,120;CL:0001014,2.99e-10,2;CL:0001016,2.99e-10,2;CL:0000738,4.45e-10,136;CL:0002087,1.73e-09,115;CL:0002032,2.03e-08,161;CL:0000837,2.03e-08,161;CL:0000037,4.84e-08,168;CL:0000988,1.34e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;2.06e-12;53 | |ontology_enrichment_development_v019=CL:0000051;2.06e-12;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!7.41e-10!6;UBERON:0002106!6.46e-09!3;UBERON:0004854!6.46e-09!3;UBERON:0009034!6.46e-09!3;UBERON:0002095!6.46e-09!3;UBERON:0004782!6.46e-09!3;UBERON:0003281!6.46e-09!3;UBERON:0009664!6.46e-09!3;UBERON:0002296!6.46e-09!3;UBERON:0005602!6.46e-09!3;UBERON:0001179!6.46e-09!3;UBERON:0006293!6.46e-09!3;UBERON:0007023!2.35e-08!115 | |ontology_enrichment_uberon=UBERON:0000200!7.41e-10!6;UBERON:0002106!6.46e-09!3;UBERON:0004854!6.46e-09!3;UBERON:0009034!6.46e-09!3;UBERON:0002095!6.46e-09!3;UBERON:0004782!6.46e-09!3;UBERON:0003281!6.46e-09!3;UBERON:0009664!6.46e-09!3;UBERON:0002296!6.46e-09!3;UBERON:0005602!6.46e-09!3;UBERON:0001179!6.46e-09!3;UBERON:0006293!6.46e-09!3;UBERON:0007023!2.35e-08!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@GATM | |short_description=p7@GATM | ||
}} | }} |
Latest revision as of 20:01, 17 September 2015
Short description: | p7@GATM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GATM_5end |
Coexpression cluster: | C189_b_splenic_tonsil_CD19_lymph_appendix_spleen |
Association with transcript: | -28bp_to_ENST00000396659_5end |
EntrezGene: | GATM |
HGNC: | 4175 |
UniProt: | P50440 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.07e-36 | 24 |
pro-B cell | 2.07e-36 | 24 |
B cell | 5.38e-32 | 14 |
lymphoid lineage restricted progenitor cell | 1.04e-16 | 52 |
lymphocyte | 2.17e-16 | 53 |
common lymphoid progenitor | 2.17e-16 | 53 |
hematopoietic lineage restricted progenitor cell | 1.71e-11 | 120 |
CD1a-positive Langerhans cell | 2.99e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.99e-10 | 2 |
leukocyte | 4.45e-10 | 136 |
nongranular leukocyte | 1.73e-09 | 115 |
hematopoietic oligopotent progenitor cell | 2.03e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.03e-08 | 161 |
hematopoietic stem cell | 4.84e-08 | 168 |
hematopoietic cell | 1.34e-07 | 177 |