FFCP PHASE1:Hg19::chr5:37840137..37840156,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2668 | |EntrezGene=2668 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4232 | |HGNC=4232 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-349bp_to_ENST00000515058_5end | |association_with_transcript=-349bp_to_ENST00000515058_5end | ||
|cluster_id=chr5:37840137..37840156,- | |||
|coexpression_cluster_id=C152 | |coexpression_cluster_id=C152 | ||
|description=CAGE_peak_2_at_GDNF_5end | |description=CAGE_peak_2_at_GDNF_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!9.95e-11!180;CL:0000057!2.99e-07!75;CL:0002556!6.07e-07!6 | |ontology_enrichment_celltype=CL:0000055!9.95e-11!180;CL:0000057!2.99e-07!75;CL:0002556!6.07e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000228;8.34e-34;1!CL:0002372;8.34e-34;1!CL:0000056;1.63e-09;4!CL:0000737;1.63e-09;4 | |ontology_enrichment_celltype_v019=CL:0000228;8.34e-34;1!CL:0002372;8.34e-34;1!CL:0000056;1.63e-09;4!CL:0000737;1.63e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000228,7.06e-34,1;CL:0002372,7.06e-34,1;CL:0000737,1.57e-09,4;CL:0000515,1.57e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.63e-09;4 | |ontology_enrichment_development_v019=CL:0000515;1.63e-09;4 | ||
|ontology_enrichment_disease=DOID:171!6.29e-09!10 | |ontology_enrichment_disease=DOID:171!6.29e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:6193;2.58e-34;1!DOID:3350;6.48e-18;2!DOID:171;2.75e-14;10!DOID:3095;5.01e-07;22!DOID:2994;5.01e-07;22 | |ontology_enrichment_disease_v019=DOID:6193;2.58e-34;1!DOID:3350;6.48e-18;2!DOID:171;2.75e-14;10!DOID:3095;5.01e-07;22!DOID:2994;5.01e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,2.58e-34,1;DOID:3350,6.48e-18,2;DOID:171,2.66e-14,10;DOID:3095,4.94e-07,22;DOID:2994,4.94e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000010!3.88e-07!8;UBERON:0001758!6.07e-07!6;UBERON:0003672!6.07e-07!6 | |ontology_enrichment_uberon=UBERON:0000010!3.88e-07!8;UBERON:0001758!6.07e-07!6;UBERON:0003672!6.07e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;5.50e-34;4!UBERON:0000923;5.50e-34;4!UBERON:0010316;5.50e-34;4!UBERON:0005291;5.50e-34;4!UBERON:0007195;8.34e-34;1!UBERON:0002050;1.95e-27;5!UBERON:0005423;1.95e-27;5 | |ontology_enrichment_uberon_v019=UBERON:0002346;5.50e-34;4!UBERON:0000923;5.50e-34;4!UBERON:0010316;5.50e-34;4!UBERON:0005291;5.50e-34;4!UBERON:0007195;8.34e-34;1!UBERON:0002050;1.95e-27;5!UBERON:0005423;1.95e-27;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,9.85e-34,1 | |||
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| ||
|short_description=p2@GDNF | |short_description=p2@GDNF | ||
}} | }} |
Latest revision as of 20:08, 17 September 2015
Short description: | p2@GDNF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GDNF_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -349bp_to_ENST00000515058_5end |
EntrezGene: | GDNF |
HGNC: | 4232 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 7.06e-34 | 1 |
myotube | 7.06e-34 | 1 |
striated muscle cell | 1.57e-09 | 4 |
skeletal muscle myoblast | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 9.85e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.58e-34 | 1 |
mesenchymal cell neoplasm | 6.48e-18 | 2 |
neuroectodermal tumor | 2.66e-14 | 10 |
germ cell and embryonal cancer | 4.94e-07 | 22 |
germ cell cancer | 4.94e-07 | 22 |