FFCP PHASE1:Hg19::chr4:42154250..42154256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389206 | |EntrezGene=389206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23815 | |HGNC=23815 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWN6 | |UniProt=F5GWN6 | ||
|association_with_transcript=-102bp_to_ENST00000411720_5end | |association_with_transcript=-102bp_to_ENST00000411720_5end | ||
|cluster_id=chr4:42154250..42154256,- | |||
|coexpression_cluster_id=C215 | |coexpression_cluster_id=C215 | ||
|description=CAGE_peak_12_at_BEND4_5end | |description=CAGE_peak_12_at_BEND4_5end | ||
|id=chr4:42154250..42154256,- | |id=chr4:42154250..42154256,- | ||
|ontology_enrichment_celltype=CL:0000333;1.71e-14;5 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000333;1.71e-14;5 | ||
|ontology_enrichment_disease=DOID:3095;4.26e-13;22!DOID:2994;4.26e-13;22!DOID:169;2.59e-12;6!DOID:1036;1.24e-09;8!DOID:171;6.34e-08;10 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0000013;1.71e-14;5!UBERON:0002410;1.71e-14;5!UBERON:0000010;1.16e-08;8 | |ontology_enrichment_development_v019=UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;4.26e-13;22!DOID:2994;4.26e-13;22!DOID:169;2.59e-12;6!DOID:1036;1.24e-09;8!DOID:171;6.34e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.26e-13,22;DOID:2994,4.26e-13,22;DOID:169,2.45e-12,6;DOID:1036,1.24e-09,8;DOID:171,6.13e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001950!2.65e-10!20;UBERON:0000073!2.56e-09!94;UBERON:0001016!2.56e-09!94;UBERON:0002619!3.09e-09!22;UBERON:0000956!6.00e-08!25;UBERON:0000203!6.00e-08!25;UBERON:0005743!1.22e-07!86;UBERON:0001017!2.48e-07!82;UBERON:0001869!4.14e-07!32;UBERON:0000200!6.69e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.71e-14;5!UBERON:0002410;1.71e-14;5!UBERON:0000010;1.16e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.60e-14,5;UBERON:0002410,1.60e-14,5;UBERON:0000010,1.12e-08,8 | |||
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| ||
|short_description=p12@BEND4 | |short_description=p12@BEND4 | ||
}} | }} |
Latest revision as of 20:09, 17 September 2015
Short description: | p12@BEND4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_BEND4_5end |
Coexpression cluster: | C215_chronic_acute_peripheral_Hepatocyte_osteosarcoma_NK_immature |
Association with transcript: | -102bp_to_ENST00000411720_5end |
EntrezGene: | BEND4 |
HGNC: | 23815 |
UniProt: | F5GWN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.60e-14 | 5 |
autonomic nervous system | 1.60e-14 | 5 |
peripheral nervous system | 1.12e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.26e-13 | 22 |
germ cell cancer | 4.26e-13 | 22 |
neuroendocrine tumor | 2.45e-12 | 6 |
chronic leukemia | 1.24e-09 | 8 |
neuroectodermal tumor | 6.13e-08 | 10 |