FFCP PHASE1:Hg19::chr17:76120741..76120753,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11322 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18021 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z403 | |||
|association_with_transcript=-76bp_to_BC035648_5end | |||
|cluster_id=chr17:76120741..76120753,- | |||
|description=CAGE_peak_15_at_TMC6_5end | |||
|id=chr17:76120741..76120753,- | |||
|ontology_enrichment_celltype=CL:0000037!4.85e-27!172;CL:0000566!4.85e-27!172;CL:0000988!6.62e-25!182;CL:0002032!6.15e-23!165;CL:0000837!6.15e-23!165;CL:0002087!1.41e-21!119;CL:0000738!5.86e-21!140;CL:0002031!1.92e-20!124;CL:0002393!8.16e-16!9;CL:0002397!8.16e-16!9;CL:0000763!1.45e-13!112;CL:0000049!1.45e-13!112;CL:0000839!9.22e-12!70;CL:0000557!1.58e-11!71;CL:0000945!3.43e-11!24;CL:0000826!3.43e-11!24;CL:0002194!1.05e-10!63;CL:0000576!1.05e-10!63;CL:0000040!1.05e-10!63;CL:0000559!1.05e-10!63;CL:0002057!1.13e-10!42;CL:0000875!1.84e-10!3;CL:0002396!1.84e-10!3;CL:0000766!1.85e-10!76;CL:0002009!3.01e-10!65;CL:0000860!9.59e-10!45;CL:0000817!1.24e-09!3;CL:0000838!1.43e-09!52;CL:0000542!2.53e-09!53;CL:0000051!2.53e-09!53;CL:0000785!2.91e-07!2;CL:0000955!2.91e-07!2;CL:0000818!2.91e-07!2;CL:0000954!2.91e-07!2;CL:0000816!2.91e-07!2;CL:0000134!4.19e-07!358;CL:0002320!9.11e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000875;2.30e-30;3!CL:0002396;2.30e-30;3!CL:0000785;3.67e-23;1!CL:0000819;3.67e-23;1!CL:0000945;4.42e-15;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,1.98e-30,3;CL:0002396,1.98e-30,3;CL:0000819,2.10e-23,1;CL:0000945,3.96e-15,24;CL:0000826,3.96e-15,24;CL:0000785,2.07e-12,2;CL:0000955,2.07e-12,2;CL:0000818,2.07e-12,2;CL:0000954,2.07e-12,2;CL:0000816,2.07e-12,2;CL:0002393,7.58e-11,9;CL:0002397,7.58e-11,9;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177;CL:0002087,3.21e-09,115;CL:0002031,7.86e-09,120;CL:0000817,1.04e-08,3;CL:0000738,8.99e-08,136;CL:0000838,3.51e-07,52;CL:0000542,4.73e-07,53;CL:0000051,4.73e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000954;2.74e-12;2 | |||
|ontology_enrichment_disease=DOID:2531!7.18e-10!51;DOID:0060083!7.18e-10!51;DOID:1240!1.16e-08!39;DOID:8692!5.79e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:630;1.19e-23;1!DOID:0050177;1.19e-23;1!DOID:0050427;1.19e-23;1!DOID:0060073;3.67e-23;1!DOID:8675;3.67e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.34e-23,1;DOID:0050177,1.34e-23,1;DOID:0050427,1.34e-23,1;DOID:0060073,2.10e-23,1;DOID:8675,2.10e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.73e-16!102;UBERON:0003061!1.73e-16!102;UBERON:0002193!1.42e-15!112;UBERON:0002371!6.65e-11!80;UBERON:0001474!8.53e-10!86;UBERON:0002405!2.24e-09!115;UBERON:0004765!1.27e-07!101;UBERON:0001434!1.27e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.23150884174919,0.629686250509434,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0,0,1.42506371870624,3.38158351238453,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0.144269212976445,0,0,0,0,0.635020748171649,0,0,0.684704037099577,0.626719583092093,0,0,0,1.21079824314629,0.425846237690326,0,0,0.447352215784832,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984678443688556,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,1.82454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,3.20568492303233 | |||
|short_description=p15@TMC6 | |||
}} |
Latest revision as of 20:18, 17 September 2015
Short description: | p15@TMC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_TMC6_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_BC035648_5end |
EntrezGene: | TMC6 |
HGNC: | 18021 |
UniProt: | Q7Z403 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 1.98e-30 | 3 |
CD14-low, CD16-positive monocyte | 1.98e-30 | 3 |
B-1 B cell | 2.10e-23 | 1 |
lymphocyte of B lineage | 3.96e-15 | 24 |
pro-B cell | 3.96e-15 | 24 |
mature B cell | 2.07e-12 | 2 |
pre-B-II cell | 2.07e-12 | 2 |
transitional stage B cell | 2.07e-12 | 2 |
small pre-B-II cell | 2.07e-12 | 2 |
immature B cell | 2.07e-12 | 2 |
intermediate monocyte | 7.58e-11 | 9 |
CD14-positive, CD16-positive monocyte | 7.58e-11 | 9 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
nongranular leukocyte | 3.21e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 7.86e-09 | 120 |
precursor B cell | 1.04e-08 | 3 |
leukocyte | 8.99e-08 | 136 |
lymphoid lineage restricted progenitor cell | 3.51e-07 | 52 |
lymphocyte | 4.73e-07 | 53 |
common lymphoid progenitor | 4.73e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.34e-23 | 1 |
monogenic disease | 1.34e-23 | 1 |
xeroderma pigmentosum | 1.34e-23 | 1 |
lymphatic system cancer | 2.10e-23 | 1 |
lymphosarcoma | 2.10e-23 | 1 |