FFCP PHASE2:Hg19::chr3:25469875..25469893,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5915 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9865 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9865 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F1D8S6,P10826 | ||
|association_with_transcript=41bp_to_NM_000965,uc003cdh.2_5end | |association_with_transcript=41bp_to_NM_000965,uc003cdh.2_5end | ||
|cluster_id=chr3:25469875..25469893,+ | |cluster_id=chr3:25469875..25469893,+ | ||
Latest revision as of 20:32, 17 September 2015
| Short description: | p5@RARB |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_RARB_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 41bp_to_NM_000965, uc003cdh.2_5end |
| EntrezGene: | RARB |
| HGNC: | 9865 |
| UniProt: | F1D8S6P10826 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@RARB |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| smooth muscle cell of the carotid artery | 2.86e-10 | 2 |
| smooth muscle cell of the brachiocephalic vasculature | 8.07e-09 | 2 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| corpus striatum | 8.44e-18 | 4 |
| striatum | 8.44e-18 | 4 |
| ventral part of telencephalon | 8.44e-18 | 4 |
| future corpus striatum | 8.44e-18 | 4 |
| caudate-putamen | 8.94e-14 | 3 |
| dorsal striatum | 8.94e-14 | 3 |
| carotid artery segment | 2.86e-10 | 2 |
| telencephalic nucleus | 3.31e-10 | 7 |
| caudate nucleus | 8.62e-10 | 2 |
| future caudate nucleus | 8.62e-10 | 2 |
Showing 1 to 10 of 28 entries
