FFCP PHASE1:Hg19::chr4:4543700..4543759,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53407 | |EntrezGene=53407 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15942 | |HGNC=15942 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2W9,D6RF48 | |UniProt=Q9P2W9,D6RF48 | ||
|association_with_transcript=0bp_to_ENST00000306200,ENST00000505286,ENST00000512780_5end | |association_with_transcript=0bp_to_ENST00000306200,ENST00000505286,ENST00000512780_5end | ||
|cluster_id=chr4:4543700..4543759,- | |||
|description=CAGE_peak_1_at_STX18_5end | |description=CAGE_peak_1_at_STX18_5end | ||
|id=chr4:4543700..4543759,- | |id=chr4:4543700..4543759,- | ||
|ontology_enrichment_celltype=CL:0000057!7.06e-13!75;CL:0002620!1.33e-09!23;CL:0000048!1.53e-07!430;CL:0000134!4.14e-07!358;CL:0000723!8.87e-07!436 | |ontology_enrichment_celltype=CL:0000057!7.06e-13!75;CL:0002620!1.33e-09!23;CL:0000048!1.53e-07!430;CL:0000134!4.14e-07!358;CL:0000723!8.87e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.47e-09;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.59e-12,76;CL:0002620,1.33e-09,23;CL:0000048,2.98e-08,427;CL:0000839,8.22e-08,66;CL:0000134,9.14e-08,354;CL:0000473,1.65e-07,48;CL:0000234,1.65e-07,48;CL:0000723,1.91e-07,433;CL:0002320,2.98e-07,361;CL:0002194,9.34e-07,59;CL:0000576,9.34e-07,59;CL:0000040,9.34e-07,59;CL:0000559,9.34e-07,59;CL:0000219,9.73e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.36e-07!375 | |ontology_enrichment_uberon=UBERON:0002384!1.36e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.89e-08,371 | |||
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| ||
|short_description=p1@STX18 | |short_description=p1@STX18 | ||
}} | }} |
Latest revision as of 21:16, 17 September 2015
Short description: | p1@STX18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STX18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000306200, ENST00000505286, ENST00000512780_5end |
EntrezGene: | STX18 |
HGNC: | 15942 |
UniProt: | Q9P2W9D6RF48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.59e-12 | 76 |
skin fibroblast | 1.33e-09 | 23 |
multi fate stem cell | 2.98e-08 | 427 |
myeloid lineage restricted progenitor cell | 8.22e-08 | 66 |
mesenchymal cell | 9.14e-08 | 354 |
defensive cell | 1.65e-07 | 48 |
phagocyte | 1.65e-07 | 48 |
somatic stem cell | 1.91e-07 | 433 |
connective tissue cell | 2.98e-07 | 361 |
monopoietic cell | 9.34e-07 | 59 |
monocyte | 9.34e-07 | 59 |
monoblast | 9.34e-07 | 59 |
promonocyte | 9.34e-07 | 59 |
motile cell | 9.73e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.89e-08 | 371 |