FFCP PHASE1:Hg19::chr3:3168614..3168658,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51095 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17341 | |||
|TSSclassifier=strong | |||
|UniProt=Q96Q11 | |||
|association_with_transcript=0bp_to_ENST00000280591,ENST00000339437,ENST00000434583,ENST00000465998_5end | |||
|cluster_id=chr3:3168614..3168658,+ | |||
|description=CAGE_peak_1_at_TRNT1_5end | |||
|id=chr3:3168614..3168658,+ | |||
|ontology_enrichment_celltype=CL:0002032!2.20e-10!165;CL:0000837!2.20e-10!165;CL:0000037!3.99e-10!172;CL:0000566!3.99e-10!172;CL:0000945!4.44e-10!24;CL:0000826!4.44e-10!24;CL:0000988!2.53e-09!182;CL:0000542!1.70e-08!53;CL:0000051!1.70e-08!53;CL:0000838!4.41e-08!52;CL:0000134!8.11e-07!358;CL:0002031!9.28e-07!124;CL:0000219!9.36e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.47e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.44e-10,24;CL:0000826,4.44e-10,24;CL:0002032,6.36e-10,161;CL:0000837,6.36e-10,161;CL:0000037,1.14e-09,168;CL:0000988,3.16e-09,177;CL:0000542,1.70e-08,53;CL:0000051,1.70e-08,53;CL:0000838,4.41e-08,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.42e-11!51;DOID:0060083!1.42e-11!51;DOID:162!3.31e-11!235;DOID:14566!3.87e-11!239;DOID:1240!3.73e-08!39;DOID:0050686!1.50e-07!137;DOID:8692!6.25e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.87e-07;51!DOID:0060083;2.87e-07;51!DOID:1240;6.16e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.42e-11,51;DOID:0060083,1.42e-11,51;DOID:162,3.31e-11,235;DOID:14566,3.87e-11,239;DOID:1240,3.73e-08,39;DOID:0050686,1.50e-07,137;DOID:8692,6.25e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@TRNT1 | |||
}} |
Latest revision as of 22:44, 17 September 2015
Short description: | p1@TRNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRNT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000280591, ENST00000339437, ENST00000434583, ENST00000465998_5end |
EntrezGene: | TRNT1 |
HGNC: | 17341 |
UniProt: | Q96Q11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.44e-10 | 24 |
pro-B cell | 4.44e-10 | 24 |
hematopoietic oligopotent progenitor cell | 6.36e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.36e-10 | 161 |
hematopoietic stem cell | 1.14e-09 | 168 |
hematopoietic cell | 3.16e-09 | 177 |
lymphocyte | 1.70e-08 | 53 |
common lymphoid progenitor | 1.70e-08 | 53 |
lymphoid lineage restricted progenitor cell | 4.41e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.42e-11 | 51 |
immune system cancer | 1.42e-11 | 51 |
cancer | 3.31e-11 | 235 |
disease of cellular proliferation | 3.87e-11 | 239 |
leukemia | 3.73e-08 | 39 |
organ system cancer | 1.50e-07 | 137 |
myeloid leukemia | 6.25e-07 | 31 |