FFCP PHASE1:Hg19::chr2:165424899..165424913,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2888 | |EntrezGene=2888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4565 | |HGNC=4565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=80bp_to_ENST00000469573_5end | |||
|cluster_id=chr2:165424899..165424913,- | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_6_at_GRB14_5end | |||
|id=chr2:165424899..165424913,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;6.43e-14;2!CL:0000182;3.07e-09;12!CL:0002563;1.31e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,6.43e-14,2;CL:0000182,3.41e-09,12;CL:0002563,1.31e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.08e-18!115;UBERON:0004921!3.09e-09!129;UBERON:0004185!3.09e-09!129;UBERON:0000160!3.33e-07!27;UBERON:0000077!3.68e-07!130;UBERON:0001723!3.81e-07!3;UBERON:0001033!3.81e-07!3;UBERON:0010056!3.81e-07!3;UBERON:0000059!4.18e-07!11;UBERON:0001007!5.58e-07!155;UBERON:0001555!5.58e-07!155;UBERON:0007026!5.58e-07!155;UBERON:0005409!6.22e-07!35;UBERON:0004119!6.69e-07!169;UBERON:0000925!6.69e-07!169;UBERON:0006595!6.69e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;3.58e-26;1!UBERON:0001052;5.94e-26;4!UBERON:0004907;5.44e-21;5!UBERON:0000059;4.22e-10;11!UBERON:0001242;1.31e-07;4!UBERON:0001262;1.31e-07;4!UBERON:0004786;1.31e-07;4!UBERON:0004808;1.31e-07;4!UBERON:0001277;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,5.23e-26,4;UBERON:0004907,4.92e-21,5;UBERON:0000059,4.03e-10,11;UBERON:0001242,1.31e-07,4;UBERON:0001262,1.31e-07,4;UBERON:0004786,1.31e-07,4;UBERON:0004808,1.31e-07,4;UBERON:0001277,1.31e-07,4 | |||
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| ||
|short_description=p6@GRB14 | |||
}} | }} |
Latest revision as of 22:53, 17 September 2015
Short description: | p6@GRB14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GRB14_5end |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | 80bp_to_ENST00000469573_5end |
EntrezGene: | GRB14 |
HGNC: | 4565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 6.43e-14 | 2 |
hepatocyte | 3.41e-09 | 12 |
intestinal epithelial cell | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 5.23e-26 | 4 |
lower digestive tract | 4.92e-21 | 5 |
large intestine | 4.03e-10 | 11 |
intestinal mucosa | 1.31e-07 | 4 |
wall of intestine | 1.31e-07 | 4 |
gastrointestinal system mucosa | 1.31e-07 | 4 |
gastrointestinal system epithelium | 1.31e-07 | 4 |
intestinal epithelium | 1.31e-07 | 4 |