FFCP PHASE1:Hg19::chr8:30241545..30241578,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11030 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19097 | |||
|TSSclassifier=strong | |||
|UniProt=F5H357,Q93062 | |||
|association_with_transcript=-365bp_to_ENST00000538486,NM_001008710,NM_001008711,NM_001008712,NM_006867,uc003xib.2,uc003xic.1,uc003xid.1,uc003xie.1,uc011lba.1_5end | |||
|cluster_id=chr8:30241545..30241578,+ | |||
|description=CAGE_peak_9_at_RBPMS_5end | |||
|id=chr8:30241545..30241578,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.31e-07!7;CL:0000586!1.31e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.08e-17;7!CL:0000586;4.08e-17;7!CL:0002322;3.93e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.21e-17,7;CL:0000586,6.21e-17,7;CL:0002322,5.86e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.88e-08;10!UBERON:0005564;8.88e-08;10!UBERON:0006603;6.42e-07;65!UBERON:0004872;8.31e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.22e-14!115;UBERON:0000481!5.13e-10!347;UBERON:0003101!2.73e-09!22;UBERON:0000079!2.73e-09!22;UBERON:0000475!4.28e-09!365;UBERON:0003104!3.09e-08!238;UBERON:0009142!3.09e-08!238;UBERON:0002100!7.01e-08!216;UBERON:0001007!3.81e-07!155;UBERON:0001555!3.81e-07!155;UBERON:0007026!3.81e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;3.06e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.45e-07,114;UBERON:0003135,3.87e-07,11 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.422863212287913,0,0,0,0,0.631719873426831,1.04474251279935,0.245733936501509,0.697801167972428,0,0.263766978228454,0.37129905888014,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0.354668382198357,1.68203280042692,0,0.24666754841716,0,0,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.298897361103602,0,0.161872944368132,0,0.408308342509787,0,0.309977343527296,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.226864366320042,0.538168907066586,0,0,0,0,0,0,0,0,0.504867548488229,0.276149695926898,0,0,0.201504196455281,0,0,0,0,1.70763188581434,0.927708378250397,1.04574548582567,0.932949495138334,1.00928340350251,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0.4115740113314,0,1.26755034821831,0,1.18157981336281,0,0,0.171567810298526,0.109750285408626,0,0,0,0.651616610620649,1.03993478527958,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0.157702415033935,0,0,0,1.03473071292505,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0.164254312027618,0.519254429183621,0,0.241718899183244,0,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0.308061348417659,0,0,0.422206515571503,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0.48763373908959,0,0,0.682499557039929,0.141405431953713,0,0.551365343546124,0,0.438450885253763,1.15755106853338,0,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,1.61158997199083,0,0,0,0,0,0,0,0.140669416410513,0,0,0,2.19172787076177,0.828851746593443,0,0.102268682502155,0,0.311039587661807,0,0.179021174675609,0,4.63624006493588,0,0,0,0.0927680981618513,0,0.260427761085233,0,0.724999575434793,0,0.508507300585533,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,1.61595542857974,0.113942055847001,0.922255617552241,2.60297168788339,1.3037684630641,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0,0,0,0,0,0,1.47698645169619,0.816164040795739,0.424059214301822,0,1.99052386215701,0.796118080530053,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.189559738885464,0,0.207376382794494,0,0,0,0,0,0,0.347119476670262,0,0,0.698906672968121,0,0,0,0,1.84279131327997,0,0,0,0,0.0633107959558787,0.977756913674015,0.400794101257669,0.640358984218058,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,1.14580212005842,0.717873024576814,0.798716001995964,0.429226048136571,0.89268582976749,1.20930250476107,0,0,0.157566364614447,0.329663433524666,0.0674035438541849,0.0984274815147488,0,0,0.136203406111576,1.28602518772015,1.37539436597234,0.83088067605837,0,0,0.0607495566580247,0,1.26089131678717,0.734364233889974,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0.113312091520126,1.17241786942466,0,0.129282956361551,0,0.171086837884329,0.704815022316672,0.427149650270779,0.157204305099666,0,0,0,0,0,1.08803560673895,0.7520696820681,0.612691153526923,1.31149052283922,0,0,0.244052529803926,0,0.573409195690071,0,0.310482014706917,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0,0,0,0,2.30617366729152,0,0,0.138258436151731,0,0,0,0,0.491545817507439,0,0,0,0,0,0.552317850755522,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.20336525358812,0.40341013740704,0,0.785720083444267,0,0,0.0675375846183947,0,0,0,0,0,3.96968942711435,0,0.127762427639595,0,0,0,0.227662191351298,0.354809480650555,0,0,0.203909198930495,0.131545547125698,0.118193840883968,0.222462803784138,3.13972371402056,0,0,0.913158720509496,0.647782773655864,0,1.85839014859306,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.540219106755613,0,0,2.69663153929296,0,0,0.891139200981258,0,0.169927114687817,0.375935671919414,1.22469987149797,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.630832124175395,0.655593431782173,0.380095503034311,1.1218771271618,1.60330443159336,1.01084389488329,0.250707539292375,0.757786982182394,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0.839655827868079,0.434523000071005,0,0.827413057616144,0.404234377916439,0,0,0.471464371102113,0.717222053926764,0.332660356546013,0,0,0,0,0,1.34465588601153,0.406896178315738,2.66302709674205,0.201273793591026,0 | |||
|short_description=p9@RBPMS | |||
}} |
Latest revision as of 23:10, 17 September 2015
Short description: | p9@RBPMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RBPMS_5end |
Coexpression cluster: | NA |
Association with transcript: | -365bp_to_ENST00000538486, NM_001008710, NM_001008711, NM_001008712, NM_006867, uc003xib.2, uc003xic.1, uc003xid.1, uc003xie.1, uc011lba.1_5end |
EntrezGene: | RBPMS |
HGNC: | 19097 |
UniProt: | F5H357Q93062 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.21e-17 | 7 |
germ cell | 6.21e-17 | 7 |
embryonic stem cell | 5.86e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.45e-07 | 114 |
male reproductive organ | 3.87e-07 | 11 |