FFCP PHASE1:Hg19::chr6:31797613..31797631,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:31797613..31797631,+
|short_description=p7@HSPA1B
|description=CAGE_peak_7_at_HSPA1B_5end
|association_with_transcript=219bp_to_AL360193_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3304 | |EntrezGene=3304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5233 | |HGNC=5233 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=219bp_to_AL360193_5end | |||
|cluster_id=chr6:31797613..31797631,+ | |||
|description=CAGE_peak_7_at_HSPA1B_5end | |||
|id=chr6:31797613..31797631,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.96e-08;33!CL:0002057;1.96e-08;33!CL:0000473;4.98e-08;39!CL:0000234;4.98e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,9.51e-08,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.12e-09!106;DOID:0050687!1.62e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!2.67e-10!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.13e-10;9!UBERON:0001557;1.13e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,4.61e-11,19;UBERON:0001737,7.81e-11,9;UBERON:0002371,4.44e-07,76 | |||
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| ||
|short_description=p7@HSPA1B | |||
}} | }} |
Latest revision as of 00:28, 18 September 2015
Short description: | p7@HSPA1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HSPA1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 219bp_to_AL360193_5end |
EntrezGene: | HSPA1B |
HGNC: | 5233 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 9.51e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 4.61e-11 | 19 |
larynx | 7.81e-11 | 9 |
bone marrow | 4.44e-07 | 76 |