FFCP PHASE1:Hg19::chr5:43313269..43313288,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:43313269..43313288,-
|short_description=p13@HMGCS1
|description=CAGE_peak_13_at_HMGCS1_5end
|association_with_transcript=37bp_to_ENST00000511774_5end
|Ent...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3157 | |EntrezGene=3157 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5007 | |HGNC=5007 | ||
|TSSclassifier=strong | |||
|UniProt=D6RIW1 | |UniProt=D6RIW1 | ||
|association_with_transcript=37bp_to_ENST00000511774_5end | |||
|cluster_id=chr5:43313269..43313288,- | |||
|description=CAGE_peak_13_at_HMGCS1_5end | |||
|id=chr5:43313269..43313288,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.72e-10;2!CL:0002231;1.99e-07;3!CL:0002579;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,2.19e-07,3;CL:0002579,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.81e-15;4!UBERON:0000160;1.16e-09;17!UBERON:0005409;1.10e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.51e-15,4;UBERON:0000160,1.07e-09,17;UBERON:0005409,6.97e-07,25 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.550975469195755,0,0,0,0,0,0,0,0.284338464974843,0,0,0.601633342410425,0,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,1.22988438543114,0,0,0,0.301586917234893,0.277765335475589,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0.179117045405697,0,0,2.46331618947972,0.176096868026452,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0,0,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0.394061520403854,0.646882724578552,0.385029108839245,0.508189248444927,1.30139853857622,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0,0,0.0821271560138091,0,0,2.05461064305758,0,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.650756789328606,0.103041011647722,0.183138929636687,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.371606350251437,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.37428108081644,0,0,0.111443384277478,0,0,0,0.307160702099232,0.994147647766298,0.140669416410513,0,0,0,0,0,0.755798243562828,0.20453736500431,0.123084805461069,0,0.0898683511473268,0.537063524026827,0,0,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0.1137934482855,0,0.236387681767936,0,0,0.520874984799877,0,0.120596438625408,0,0,0,0.658156191461918,0.10893846351899,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0.421996129056054,0,0.424059214301822,0,0,0.265372693510018,0.611030144933625,0.296521128680622,0.370691816839509,0.104421949505455,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0.91821828489147,0,0.150323419414493,0.103688191397247,0.664653872707185,0,0,0,0,0,0.347119476670262,0,0.174118413160805,0,0.343972064943233,0.0967563312890851,0,0.0821154570532092,0.290967049465258,0,0,0.137041924646751,0,0.253243183823515,0,0.480952921509202,0,0,0,0.114536596165916,0.343189995723929,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.787831823072237,0.741742725430498,0.539228350833479,0.0984274815147488,0,0,0,0,0.137539436597234,0,0.449947783103001,0,0.182248669974074,0,0.0788057072991982,0.157363764404994,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0.146552233678082,2.65013777824443,0.129282956361551,0.39669780522807,0,0.704815022316672,0.106787412567695,0.157204305099666,0.828478110694391,0,0.592834895693833,0.121792598380896,0,0,0,0,0.983617892129413,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.686520205190771,0.151230923763239,0.15543720058278,0,0,0.899606224327209,0.155262956876259,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0.184105950251841,0,0,0,0.323474434190045,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0.321146125482298,1.41696576325585,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.645902582527404,0,0.294443155503077,0.235939446695481,0.183428598521679,0,0.381382095467167,0,0.198916222116275,0.150420656698515,0,0.781514011233092,0,0,0.295712172434091,0.202612753855184,0,0,0.253663240775627,0,0.548257766857182,0.496211178389294,0,0,0,0.336283722218824,0,0,0.0887023701626388,0.460935950223117,0,0.203909198930495,0.197318320688547,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0,0.701818390386317,0,0,0.11294608203896,0.109940516745429,0,1.31196068783506,2.62271472604749,0,0.245148321753905,0.235676547101626,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0.665756774185513,0.201273793591026,0.320568492303233 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.550975469195755,0,0,0,0,0,0,0,0.284338464974843,0,0,0.601633342410425,0,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.326923806226917,0,0,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,1.22988438543114,0,0,0,0.301586917234893,0.277765335475589,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0.179117045405697,0,0,2.46331618947972,0.176096868026452,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0,0,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0.394061520403854,0.646882724578552,0.385029108839245,0.508189248444927,1.30139853857622,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0,0,0.0821271560138091,0,0,2.05461064305758,0,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.650756789328606,0.103041011647722,0.183138929636687,0,0,0,0,0,0.308097234229289,0.15350367472613,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.371606350251437,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.37428108081644,0,0,0.111443384277478,0,0,0,0.307160702099232,0.994147647766298,0.140669416410513,0,0,0,0,0,0.755798243562828,0.20453736500431,0.123084805461069,0,0.0898683511473268,0.537063524026827,0,0,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0.1137934482855,0,0.236387681767936,0,0,0.520874984799877,0,0.120596438625408,0,0,0,0.658156191461918,0.10893846351899,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0.421996129056054,0,0.424059214301822,0,0,0.265372693510018,0.611030144933625,0.296521128680622,0.370691816839509,0.104421949505455,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0.91821828489147,0,0.150323419414493,0.103688191397247,0.664653872707185,0,0,0,0,0,0.347119476670262,0,0.174118413160805,0,0.343972064943233,0.0967563312890851,0,0.0821154570532092,0.290967049465258,0,0,0.137041924646751,0,0.253243183823515,0,0.480952921509202,0,0,0,0.114536596165916,0.343189995723929,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.787831823072237,0.741742725430498,0.539228350833479,0.0984274815147488,0,0,0,0,0.137539436597234,0,0.449947783103001,0,0.182248669974074,0,0.0788057072991982,0.157363764404994,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0.146552233678082,2.65013777824443,0.129282956361551,0.39669780522807,0,0.704815022316672,0.106787412567695,0.157204305099666,0.828478110694391,0,0.592834895693833,0.121792598380896,0,0,0,0,0.983617892129413,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.686520205190771,0.151230923763239,0.15543720058278,0,0,0.899606224327209,0.155262956876259,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0.192914038270915,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,0,0.59996218756479,0,0,0,0.184105950251841,0,0,0,0.323474434190045,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0.3062454773532,0.321146125482298,1.41696576325585,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.645902582527404,0,0.294443155503077,0.235939446695481,0.183428598521679,0,0.381382095467167,0,0.198916222116275,0.150420656698515,0,0.781514011233092,0,0,0.295712172434091,0.202612753855184,0,0,0.253663240775627,0,0.548257766857182,0.496211178389294,0,0,0,0.336283722218824,0,0,0.0887023701626388,0.460935950223117,0,0.203909198930495,0.197318320688547,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0,0.701818390386317,0,0,0.11294608203896,0.109940516745429,0,1.31196068783506,2.62271472604749,0,0.245148321753905,0.235676547101626,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0.406896178315738,0.665756774185513,0.201273793591026,0.320568492303233 | ||
|short_description=p13@HMGCS1 | |||
}} | }} |
Latest revision as of 00:33, 18 September 2015
Short description: | p13@HMGCS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_HMGCS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENST00000511774_5end |
EntrezGene: | HMGCS1 |
HGNC: | 5007 |
UniProt: | D6RIW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 2.19e-07 | 3 |
omentum preadipocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.51e-15 | 4 |
intestine | 1.07e-09 | 17 |
gastrointestinal system | 6.97e-07 | 25 |