FFCP PHASE1:Hg19::chr5:43412425..43412499,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:43412425..43412499,-
|short_description=p2@CCL28
|description=CAGE_peak_2_at_CCL28_5end
|association_with_transcript=0bp_to_ENST00000361115,ENST00000489442...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56477 | |EntrezGene=56477 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17700 | |HGNC=17700 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRJ3,A0N0Q3 | |UniProt=Q9NRJ3,A0N0Q3 | ||
|association_with_transcript=0bp_to_ENST00000361115,ENST00000489442,ENST00000514421,NM_148672,uc003jns.2,uc003jnt.2,uc003jnu.2_5end | |||
|cluster_id=chr5:43412425..43412499,- | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_2_at_CCL28_5end | |||
|id=chr5:43412425..43412499,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;1.85e-09;86 | |||
|ontology_enrichment_disease=DOID:305!1.13e-15!106;DOID:0050687!3.17e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!7.79e-24!129;UBERON:0004185!7.79e-24!129;UBERON:0001007!1.29e-23!155;UBERON:0001555!1.29e-23!155;UBERON:0007026!1.29e-23!155;UBERON:0004119!3.62e-22!169;UBERON:0000925!3.62e-22!169;UBERON:0006595!3.62e-22!169;UBERON:0000077!1.22e-18!130;UBERON:0001041!1.12e-16!98;UBERON:0001737!2.31e-13!9;UBERON:0001004!6.43e-12!72;UBERON:0000466!7.96e-11!126;UBERON:0008947!9.62e-11!38;UBERON:0003258!9.62e-11!38;UBERON:0001044!1.21e-10!6;UBERON:0003293!1.21e-10!6;UBERON:0003294!1.21e-10!6;UBERON:0010047!1.21e-10!6;UBERON:0000167!1.21e-10!6;UBERON:0001557!1.66e-10!19;UBERON:0000464!5.52e-10!104;UBERON:0000160!6.12e-10!27;UBERON:0000065!1.48e-09!53;UBERON:0000062!6.32e-09!511;UBERON:0002294!8.91e-09!7;UBERON:0001173!8.91e-09!7;UBERON:0004912!8.91e-09!7;UBERON:0000072!2.46e-08!46;UBERON:0007023!2.80e-08!115;UBERON:0005409!4.61e-08!35;UBERON:0003104!1.06e-07!238;UBERON:0009142!1.06e-07!238;UBERON:0002553!1.98e-07!70;UBERON:0001048!3.61e-07!168;UBERON:0000166!6.78e-07!21;UBERON:0000078!8.00e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.80e-16;33!UBERON:0000160;8.63e-12;17!UBERON:0005409;7.68e-11;22!UBERON:0001555;6.18e-08;54!UBERON:0001829;1.27e-07;2!UBERON:0003127;1.63e-07;2!UBERON:0001007;1.78e-07;81!UBERON:0000341;3.28e-07;2!UBERON:0006562;3.39e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.02e-17,145;UBERON:0001555,3.02e-17,145;UBERON:0007026,3.02e-17,145;UBERON:0004921,3.00e-16,118;UBERON:0004119,9.31e-15,160;UBERON:0000925,9.31e-15,160;UBERON:0006595,9.31e-15,160;UBERON:0000160,8.24e-12,17;UBERON:0005409,2.27e-09,25;UBERON:0001041,5.11e-09,87;UBERON:0007023,1.31e-08,114;UBERON:0001829,1.27e-07,2;UBERON:0003127,1.63e-07,2;UBERON:0000341,3.19e-07,2 | |||
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| ||
|short_description=p2@CCL28 | |||
}} | }} |
Latest revision as of 00:35, 18 September 2015
Short description: | p2@CCL28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCL28_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000361115, ENST00000489442, ENST00000514421, NM_148672, uc003jns.2, uc003jnt.2, uc003jnu.2_5end |
EntrezGene: | CCL28 |
HGNC: | 17700 |
UniProt: | Q9NRJ3A0N0Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 3.02e-17 | 145 |
digestive tract | 3.02e-17 | 145 |
primitive gut | 3.02e-17 | 145 |
subdivision of digestive tract | 3.00e-16 | 118 |
endoderm-derived structure | 9.31e-15 | 160 |
endoderm | 9.31e-15 | 160 |
presumptive endoderm | 9.31e-15 | 160 |
intestine | 8.24e-12 | 17 |
gastrointestinal system | 2.27e-09 | 25 |
foregut | 5.11e-09 | 87 |
adult organism | 1.31e-08 | 114 |
major salivary gland | 1.27e-07 | 2 |
open tracheal system trachea | 1.63e-07 | 2 |
throat | 3.19e-07 | 2 |