FFCP PHASE1:Hg19::chr7:2701678..2701748,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80727 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=22222 | |||
|TSSclassifier=strong | |||
|UniProt=Q69YH1 | |||
|association_with_transcript=358bp_to_AL833825_5end | |||
|cluster_id=chr7:2701678..2701748,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_7_at_TTYH3_5end | |||
|id=chr7:2701678..2701748,+ | |||
|ontology_enrichment_celltype=CL:0002321!3.08e-15!248;CL:0000220!3.16e-15!246;CL:0000222!7.78e-13!119;CL:0000144!8.34e-13!625;CL:0002371!3.01e-12!591;CL:0000055!1.23e-11!180;CL:0000548!3.20e-09!679;CL:0000004!3.20e-09!679;CL:0000255!3.20e-09!679;CL:0000183!4.77e-09!59;CL:0000115!8.26e-09!35;CL:0000012!1.58e-08!682;CL:0000393!2.88e-08!60;CL:0000211!2.88e-08!60;CL:0002078!5.62e-08!44;CL:0000213!1.43e-07!57;CL:0000215!1.43e-07!57;CL:0000187!4.45e-07!54;CL:0000192!4.81e-07!42;CL:0000514!4.81e-07!42;CL:0000071!6.33e-07!18;CL:0002546!6.33e-07!18;CL:0002139!7.22e-07!24;CL:0000680!9.49e-07!57;CL:0000056!9.49e-07!57;CL:0000355!9.49e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.62e-09;36!CL:0002078;1.06e-07;45!CL:0002139;1.29e-07;24!CL:0000071;6.49e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.83e-11,36;CL:0000222,1.04e-10,121;CL:0002078,1.34e-09,45;CL:0002321,1.47e-09,250;CL:0002139,1.87e-07,24;CL:0000393,4.65e-07,61;CL:0000211,4.65e-07,61;CL:0000071,6.51e-07,18;CL:0002546,6.51e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;6.49e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.03e-13!659;UBERON:0002049!1.13e-11!79;UBERON:0007798!1.13e-11!79;UBERON:0000467!1.61e-11!625;UBERON:0000480!2.88e-11!626;UBERON:0000055!4.30e-11!69;UBERON:0000922!5.86e-11!612;UBERON:0001981!8.75e-11!60;UBERON:0007500!8.75e-11!60;UBERON:0004537!8.75e-11!60;UBERON:0006965!8.75e-11!60;UBERON:0004872!1.22e-10!84;UBERON:0002050!2.70e-10!605;UBERON:0005423!2.70e-10!605;UBERON:0000923!2.78e-10!604;UBERON:0005291!2.78e-10!604;UBERON:0006598!2.78e-10!604;UBERON:0002532!2.78e-10!604;UBERON:0001637!1.13e-09!42;UBERON:0003509!1.13e-09!42;UBERON:0004572!1.13e-09!42;UBERON:0003914!2.34e-09!118;UBERON:0003081!3.03e-09!216;UBERON:0000490!3.90e-08!138;UBERON:0004535!5.26e-08!110;UBERON:0000926!5.45e-08!448;UBERON:0004120!5.45e-08!448;UBERON:0006603!5.45e-08!448;UBERON:0004573!8.13e-08!33;UBERON:0004571!8.13e-08!33;UBERON:0002204!1.48e-07!167;UBERON:0001009!2.92e-07!113;UBERON:0001986!6.33e-07!18;UBERON:0004638!6.33e-07!18;UBERON:0004852!6.33e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.86e-08;42!UBERON:0003509;4.86e-08;42!UBERON:0004572;4.86e-08;42!UBERON:0004573;6.48e-08;33!UBERON:0004571;6.48e-08;33!UBERON:0007500;8.71e-08;56!UBERON:0001981;8.71e-08;56!UBERON:0004537;8.71e-08;56!UBERON:0000055;1.09e-07;65!UBERON:0004638;6.49e-07;18!UBERON:0001986;6.49e-07;18!UBERON:0004852;6.49e-07;18!UBERON:0003914;7.66e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,5.38e-14,315;UBERON:0004120,5.38e-14,315;UBERON:0006603,5.38e-14,315;UBERON:0000055,2.72e-13,68;UBERON:0002049,3.40e-13,78;UBERON:0007798,3.40e-13,78;UBERON:0007500,4.75e-12,59;UBERON:0001981,4.75e-12,59;UBERON:0004537,4.75e-12,59;UBERON:0006965,4.75e-12,59;UBERON:0004872,1.30e-11,83;UBERON:0003081,6.90e-11,203;UBERON:0001637,7.11e-11,42;UBERON:0003509,7.11e-11,42;UBERON:0004572,7.11e-11,42;UBERON:0004535,8.12e-10,109;UBERON:0003914,1.97e-09,117;UBERON:0004573,3.58e-09,33;UBERON:0004571,3.58e-09,33;UBERON:0001009,3.79e-09,112;UBERON:0000490,2.82e-07,148;UBERON:0007503,5.17e-07,78;UBERON:0002204,5.31e-07,167;UBERON:0004638,6.51e-07,18;UBERON:0001986,6.51e-07,18;UBERON:0004852,6.51e-07,18 | |||
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| |||
|short_description=p7@TTYH3 | |||
}} |
Latest revision as of 00:42, 18 September 2015
Short description: | p7@TTYH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TTYH3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 358bp_to_AL833825_5end |
EntrezGene: | TTYH3 |
HGNC: | 22222 |
UniProt: | Q69YH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.83e-11 | 36 |
mesodermal cell | 1.04e-10 | 121 |
meso-epithelial cell | 1.34e-09 | 45 |
embryonic cell | 1.47e-09 | 250 |
endothelial cell of vascular tree | 1.87e-07 | 24 |
electrically responsive cell | 4.65e-07 | 61 |
electrically active cell | 4.65e-07 | 61 |
blood vessel endothelial cell | 6.51e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.51e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 5.38e-14 | 315 |
mesoderm-derived structure | 5.38e-14 | 315 |
presumptive mesoderm | 5.38e-14 | 315 |
vessel | 2.72e-13 | 68 |
vasculature | 3.40e-13 | 78 |
vascular system | 3.40e-13 | 78 |
epithelial tube open at both ends | 4.75e-12 | 59 |
blood vessel | 4.75e-12 | 59 |
blood vasculature | 4.75e-12 | 59 |
vascular cord | 4.75e-12 | 59 |
splanchnic layer of lateral plate mesoderm | 1.30e-11 | 83 |
lateral plate mesoderm | 6.90e-11 | 203 |
artery | 7.11e-11 | 42 |
arterial blood vessel | 7.11e-11 | 42 |
arterial system | 7.11e-11 | 42 |
cardiovascular system | 8.12e-10 | 109 |
epithelial tube | 1.97e-09 | 117 |
systemic artery | 3.58e-09 | 33 |
systemic arterial system | 3.58e-09 | 33 |
circulatory system | 3.79e-09 | 112 |
unilaminar epithelium | 2.82e-07 | 148 |
epithelial vesicle | 5.17e-07 | 78 |
musculoskeletal system | 5.31e-07 | 167 |
blood vessel endothelium | 6.51e-07 | 18 |
endothelium | 6.51e-07 | 18 |
cardiovascular system endothelium | 6.51e-07 | 18 |