FFCP PHASE1:Hg19::chr8:32579302..32579316,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3084 | |EntrezGene=3084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7997 | |HGNC=7997 | ||
|TSSclassifier=strong | |||
|UniProt=E5RHP6 | |UniProt=E5RHP6 | ||
|association_with_transcript=-20bp_to_ENST00000522402_5end | |association_with_transcript=-20bp_to_ENST00000522402_5end | ||
|cluster_id=chr8:32579302..32579316,+ | |||
|coexpression_cluster_id=C125 | |coexpression_cluster_id=C125 | ||
|description=CAGE_peak_9_at_NRG1_5end | |description=CAGE_peak_9_at_NRG1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!3.49e-21!180;CL:0000057!1.23e-12!75;CL:0002620!2.15e-11!23;CL:0002334!5.94e-08!12;CL:0002539!7.67e-08!10;CL:0000243!9.19e-08!15;CL:0000125!9.19e-08!15;CL:0000030!9.19e-08!15;CL:0000339!9.19e-08!15;CL:0000359!1.36e-07!32;CL:0002580!1.49e-07!3;CL:0002573!5.55e-07!2;CL:0000095!8.91e-07!17;CL:0000123!8.91e-07!17 | |ontology_enrichment_celltype=CL:0000055!3.49e-21!180;CL:0000057!1.23e-12!75;CL:0002620!2.15e-11!23;CL:0002334!5.94e-08!12;CL:0002539!7.67e-08!10;CL:0000243!9.19e-08!15;CL:0000125!9.19e-08!15;CL:0000030!9.19e-08!15;CL:0000339!9.19e-08!15;CL:0000359!1.36e-07!32;CL:0002580!1.49e-07!3;CL:0002573!5.55e-07!2;CL:0000095!8.91e-07!17;CL:0000123!8.91e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.98e-12;23!CL:0002580;3.89e-09;3!CL:0000319;6.59e-08;1!CL:0000228;3.00e-07;1!CL:0002372;3.00e-07;1 | |ontology_enrichment_celltype_v019=CL:0002620;3.98e-12;23!CL:0002580;3.89e-09;3!CL:0000319;6.59e-08;1!CL:0000228;3.00e-07;1!CL:0002372;3.00e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.21e-12,23;CL:0000057,6.05e-11,76;CL:0002580,4.15e-09,3;CL:0000319,6.59e-08,1;CL:0000228,2.35e-07,1;CL:0002372,2.35e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060072!2.24e-09!4;DOID:0060084!6.80e-08!3;DOID:127!6.80e-08!3 | |ontology_enrichment_disease=DOID:0060072!2.24e-09!4;DOID:0060084!6.80e-08!3;DOID:127!6.80e-08!3 | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.16e-18;3!DOID:127;1.16e-18;3!DOID:0060072;3.85e-14;4!DOID:3030;6.59e-08;1!DOID:6193;1.47e-07;1 | |ontology_enrichment_disease_v019=DOID:0060084;1.16e-18;3!DOID:127;1.16e-18;3!DOID:0060072;3.85e-14;4!DOID:3030;6.59e-08;1!DOID:6193;1.47e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.53e-18,3;DOID:127,1.53e-18,3;DOID:0060072,4.73e-14,4;DOID:3030,6.59e-08,1;DOID:6193,1.25e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004573!1.39e-08!33;UBERON:0004571!1.39e-08!33;UBERON:0001637!2.00e-08!42;UBERON:0003509!2.00e-08!42;UBERON:0004572!2.00e-08!42;UBERON:0004237!7.67e-08!10;UBERON:0004695!7.67e-08!10;UBERON:0002111!7.67e-08!10;UBERON:0004178!7.67e-08!10;UBERON:0002097!1.83e-07!40;UBERON:0000947!4.07e-07!21;UBERON:0010191!4.07e-07!21 | |ontology_enrichment_uberon=UBERON:0004573!1.39e-08!33;UBERON:0004571!1.39e-08!33;UBERON:0001637!2.00e-08!42;UBERON:0003509!2.00e-08!42;UBERON:0004572!2.00e-08!42;UBERON:0004237!7.67e-08!10;UBERON:0004695!7.67e-08!10;UBERON:0002111!7.67e-08!10;UBERON:0004178!7.67e-08!10;UBERON:0002097!1.83e-07!40;UBERON:0000947!4.07e-07!21;UBERON:0010191!4.07e-07!21 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,1.2663051166458,0.264818361626438,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04962380671065,0,0,1.20036438433761,0.206105058476878,1.03056216018252,0.18611685633159,5.06328996723799,1.36411807225678,0.504867548488229,0.276149695926898,0,2.84007674013291,1.41052937518696,0.508681776931463,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,1.00789276919316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,1.24053903909388,3.22270143904931,0.280660094433074,0.128139149255701,3.58195074346692,0,0,0,0,0.246381468041427,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0.929691098594572,7.870308670766,0.6970372701606,0,0.532306030317022,2.60979897622522,1.11194531462352,0.715624433709956,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,1.75380354101505,0,0,1.01455188481352,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0,8.80822055099881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,2.92376255201748,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,1.44285876452761,0,0,0,0.916292769327325,0,0,0,0,0.271808412147228,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,2.5926644736038,1.30634944043764,0,0,2.3854323049959,0,0,0,0.387848869084652,0,2.39521573038061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0.124980407962107,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813741466409323,0,0,0,0.796191777397232,0,0.343395705182793,0.336749488765919,0,0,0,0,1.58694147858591,0.231522474323834,0.244736704506468,3.93995450379272,0,0,7.24425498378112,1.73622634443823,0,0.256241518587947,0,0,0,0,0,0,0,92.6563866001522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10211352747467,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.473328002922261,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,1.2663051166458,0.264818361626438,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04962380671065,0,0,1.20036438433761,0.206105058476878,1.03056216018252,0.18611685633159,5.06328996723799,1.36411807225678,0.504867548488229,0.276149695926898,0,2.84007674013291,1.41052937518696,0.508681776931463,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,1.00789276919316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,1.24053903909388,3.22270143904931,0.280660094433074,0.128139149255701,3.58195074346692,0,0,0,0,0.246381468041427,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0.929691098594572,7.870308670766,0.6970372701606,0,0.532306030317022,2.60979897622522,1.11194531462352,0.715624433709956,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,1.75380354101505,0,0,1.01455188481352,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728163130497081,0,8.80822055099881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,2.92376255201748,0,0,0,0,0,0,0.274083849293502,0.19871461170299,0,0,1.44285876452761,0,0,0,0.916292769327325,0,0,0,0,0.271808412147228,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,2.5926644736038,1.30634944043764,0,0,2.3854323049959,0,0,0,0.387848869084652,0,2.39521573038061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0.124980407962107,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813741466409323,0,0,0,0.796191777397232,0,0.343395705182793,0.336749488765919,0,0,0,0,1.58694147858591,0.231522474323834,0.244736704506468,3.93995450379272,0,0,7.24425498378112,1.73622634443823,0,0.256241518587947,0,0,0,0,0,0,0,92.6563866001522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10211352747467,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.473328002922261,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@NRG1 | |short_description=p9@NRG1 | ||
}} | }} |
Latest revision as of 00:44, 18 September 2015
Short description: | p9@NRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NRG1_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | -20bp_to_ENST00000522402_5end |
EntrezGene: | NRG1 |
HGNC: | 7997 |
UniProt: | E5RHP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.21e-12 | 23 |
fibroblast | 6.05e-11 | 76 |
preadipocyte of the breast | 4.15e-09 | 3 |
mucus secreting cell | 6.59e-08 | 1 |
multinucleate cell | 2.35e-07 | 1 |
myotube | 2.35e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.53e-18 | 3 |
leiomyoma | 1.53e-18 | 3 |
benign neoplasm | 4.73e-14 | 4 |
mucinous adenocarcinoma | 6.59e-08 | 1 |
epithelioid sarcoma | 1.25e-07 | 1 |