FFCP PHASE1:Hg19::chr16:812506..812518,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7371 | |||
|TSSclassifier=strong | |||
|UniProt=Q13421 | |||
|association_with_transcript=-75bp_to_ENST00000382862_5end | |||
|cluster_id=chr16:812506..812518,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_5_at_MSLN_5end | |||
|id=chr16:812506..812518,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.00e-13!254;CL:0000349!7.34e-08!3;CL:0002577!7.34e-08!3;CL:0002178!3.25e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002577;9.98e-21;3!CL:0000349;5.12e-17;19!CL:0002097;3.78e-14;2!CL:0002537;2.26e-13;5!CL:0000174;9.80e-10;3!CL:0000313;2.04e-08;1!CL:0000150;4.38e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,7.12e-21,3;CL:0000349,4.54e-17,19;CL:0002097,4.32e-14,2;CL:0002537,2.27e-13,5;CL:0000174,1.07e-09,3;CL:0000313,2.04e-08,1;CL:0000150,4.52e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.40e-08;1 | |||
|ontology_enrichment_disease=DOID:305!5.12e-15!106;DOID:0050687!3.65e-10!143;DOID:162!3.82e-07!235;DOID:14566!8.92e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.20e-14;2!DOID:2152;2.04e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.47e-14,2;DOID:2152,2.04e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!9.99e-15!14;UBERON:0000158!9.99e-15!14;UBERON:0004119!7.94e-14!169;UBERON:0000925!7.94e-14!169;UBERON:0006595!7.94e-14!169;UBERON:0001737!5.33e-13!9;UBERON:0003124!2.13e-11!7;UBERON:0008947!2.17e-11!38;UBERON:0003258!2.17e-11!38;UBERON:0004921!1.32e-10!129;UBERON:0004185!1.32e-10!129;UBERON:0000077!3.79e-10!130;UBERON:0000065!5.00e-10!53;UBERON:0001007!5.71e-10!155;UBERON:0001555!5.71e-10!155;UBERON:0007026!5.71e-10!155;UBERON:0001987!8.25e-10!4;UBERON:0004340!8.25e-10!4;UBERON:0001004!1.11e-09!72;UBERON:0005409!6.89e-08!35;UBERON:0000478!1.42e-07!24;UBERON:0001041!3.01e-07!98;UBERON:0001557!8.50e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;8.76e-27;4!UBERON:0000478;3.82e-17;24!UBERON:0003127;2.79e-14;2!UBERON:0005631;1.51e-11;10!UBERON:0000158;1.51e-11;10!UBERON:0002369;9.80e-10;3!UBERON:0001235;9.80e-10;3!UBERON:0006858;9.80e-10;3!UBERON:0000305;1.10e-09;7!UBERON:0004911;2.04e-08;1!UBERON:0001301;8.40e-08;1!UBERON:0002171;8.40e-08;1!UBERON:0006518;8.40e-08;1!UBERON:0008949;8.40e-08;1!UBERON:0000101;8.40e-08;1!UBERON:0002167;8.40e-08;1!UBERON:0001052;9.32e-08;4!UBERON:0000474;3.01e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.16e-30,14;UBERON:0000158,3.16e-30,14;UBERON:0001987,7.42e-27,4;UBERON:0004340,7.42e-27,4;UBERON:0003124,6.10e-24,7;UBERON:0000478,3.62e-17,24;UBERON:0003127,3.09e-14,2;UBERON:0004175,2.82e-12,25;UBERON:0000995,5.25e-11,21;UBERON:0005795,1.76e-10,22;UBERON:0003975,1.76e-10,22;UBERON:0002369,1.07e-09,3;UBERON:0001235,1.07e-09,3;UBERON:0006858,1.07e-09,3;UBERON:0000305,1.10e-09,7;UBERON:0004871,1.57e-08,8;UBERON:0004911,2.04e-08,1;UBERON:0003134,4.08e-08,37;UBERON:0000474,4.08e-08,37;UBERON:0001301,7.10e-08,1;UBERON:0003133,7.86e-08,48;UBERON:0001052,8.42e-08,4;UBERON:0002171,1.06e-07,1;UBERON:0006518,1.06e-07,1;UBERON:0008949,1.06e-07,1;UBERON:0000101,1.06e-07,1;UBERON:0002167,1.06e-07,1;UBERON:0003100,3.06e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.709840800239063,0.337169380156203,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63753085735511,1.66435439510497,6.95497674658265,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.509752546090077,0.831076008928724,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55567026775618,0,0,0,0,326.60245512116,9.79983446747707,185.525064067936,0,0,0,0,0.211125408127993,0.996239941255349,0,0,0,0,0,0,5.01259289091706,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0.945550727071745,0,0,0,0,0,0,0,0,0,5.22904624891153,0,0,0,0,0,0,62.2052261477243,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,1.39781334593624,0,0,0.0730893170861856,0.328461828212837,0,0,0.677942222341597,0,0,0,0.586654148204409,0,0,0.39961921916426,0.576361668616424,0.114536596165916,0,0.14405479798815,0,7.77790314235425,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38823636338003,0.628817220398664,1.24271716604159,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,1.34833881285112,3.00218227924896,0,0,0,0.244736704506468,0.179088841081487,0.926404341482917,1.75427239662966,0.176689145945881,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0.225630985047772,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33053555243958,0,0,0,0,0.590969204419841,0,0,0,4.76462677633441,4.56579360254748,0,0,0,0,0,0,0,0,0,1.38251932362818,0,0,0,0,3.43660302816075,0,0,12.5278083613527,4.02415957822496,4.02329152441489,0,0,0,0,0,0,0,0.11294608203896,0,0,0.231522474323834,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.253397002022874,0,0,0.0918948995348449,0,0,0,0,0,1.70587185520785,0.476128862927481,0,0,0.224263725161227,0.0636471582781649,0,0,0,0.202056159043763,4.30333232356058,1.33064142618405,0,0.853818767021724,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@MSLN | |||
}} |
Latest revision as of 00:48, 18 September 2015
Short description: | p5@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MSLN_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -75bp_to_ENST00000382862_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | Q13421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 7.12e-21 | 3 |
extraembryonic cell | 4.54e-17 | 19 |
cortical cell of adrenal gland | 4.32e-14 | 2 |
amnion mesenchymal stem cell | 2.27e-13 | 5 |
steroid hormone secreting cell | 1.07e-09 | 3 |
serous secreting cell | 2.04e-08 | 1 |
glandular epithelial cell | 4.52e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.16e-30 | 14 |
membranous layer | 3.16e-30 | 14 |
placenta | 7.42e-27 | 4 |
allantois | 7.42e-27 | 4 |
chorion | 6.10e-24 | 7 |
extraembryonic structure | 3.62e-17 | 24 |
open tracheal system trachea | 3.09e-14 | 2 |
internal genitalia | 2.82e-12 | 25 |
uterus | 5.25e-11 | 21 |
embryonic uterus | 1.76e-10 | 22 |
internal female genitalia | 1.76e-10 | 22 |
adrenal gland | 1.07e-09 | 3 |
adrenal cortex | 1.07e-09 | 3 |
adrenal/interrenal gland | 1.07e-09 | 3 |
amnion | 1.10e-09 | 7 |
somatic layer of lateral plate mesoderm | 1.57e-08 | 8 |
epithelium of female gonad | 2.04e-08 | 1 |
female reproductive organ | 4.08e-08 | 37 |
female reproductive system | 4.08e-08 | 37 |
epididymis | 7.10e-08 | 1 |
reproductive organ | 7.86e-08 | 48 |
rectum | 8.42e-08 | 4 |
lower lobe of right lung | 1.06e-07 | 1 |
right lung lobe | 1.06e-07 | 1 |
lower lobe of lung | 1.06e-07 | 1 |
lobe of lung | 1.06e-07 | 1 |
right lung | 1.06e-07 | 1 |
female organism | 3.06e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.47e-14 | 2 |
ovary epithelial cancer | 2.04e-08 | 1 |