FFCP PHASE1:Hg19::chr11:45827032..45827044,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr11:45827032..45827044,+ to FFCP PHASE1:Hg19::chr11:45827032..45827044,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55343 | |EntrezGene=55343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20197 | |HGNC=20197 | ||
|TSSclassifier=strong | |||
|UniProt=Q96K20 | |UniProt=Q96K20 | ||
|association_with_transcript=332bp_to_ENST00000540685_5end | |||
|cluster_id=chr11:45827032..45827044,+ | |||
|description=CAGE_peak_8_at_SLC35C1_5end | |||
|id=chr11:45827032..45827044,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.97e-11!254;CL:0002321!4.38e-09!248;CL:0000220!8.13e-09!246 | |||
|ontology_enrichment_celltype_v019=CL:0002536;3.44e-11;2!CL:0002149;3.33e-08;6!CL:0002255;3.33e-08;6!CL:0002592;9.68e-08;3!CL:0000182;4.31e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,2.97e-11,2;CL:0002149,3.61e-08,6;CL:0002255,3.61e-08,6;CL:0002592,1.01e-07,3;CL:0000182,3.17e-07,12;CL:0000223,3.40e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.34e-11;31!UBERON:0005795;2.46e-08;10!UBERON:0004161;9.02e-08;11!UBERON:0008801;7.33e-07;1 | |||
|ontology_enrichment_disease=DOID:14566!1.51e-08!239;DOID:162!6.72e-08!235;DOID:305!1.05e-07!106;DOID:0050687!2.27e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3001;3.33e-08;6!DOID:1799;7.33e-07;1!DOID:10165;7.33e-07;1!DOID:1798;7.33e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,3.61e-08,6;DOID:1799,8.67e-07,1;DOID:10165,8.67e-07,1;DOID:1798,8.67e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.27e-11;2!UBERON:0002365;1.18e-09;31!UBERON:0002330;1.18e-09;31!UBERON:0002107;1.55e-09;19!UBERON:0006925;1.55e-09;19!UBERON:0003498;9.68e-08;3!UBERON:0005985;9.68e-08;3!UBERON:0001621;9.68e-08;3!UBERON:0002423;4.25e-07;25!UBERON:0001831;7.33e-07;1!UBERON:0001567;7.33e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.21e-11,2;UBERON:0002365,7.55e-10,31;UBERON:0002330,7.55e-10,31;UBERON:0002107,1.16e-09,19;UBERON:0006925,1.16e-09,19;UBERON:0008836,1.16e-09,19;UBERON:0002417,1.70e-08,60;UBERON:0000916,1.70e-08,60;UBERON:0008835,2.94e-08,22;UBERON:0003894,2.94e-08,22;UBERON:0005172,5.13e-08,54;UBERON:0005173,5.13e-08,54;UBERON:0009854,7.17e-08,23;UBERON:0001621,1.01e-07,3;UBERON:0003104,1.66e-07,160;UBERON:0009142,1.66e-07,160;UBERON:0005256,2.01e-07,122;UBERON:0007499,3.43e-07,25;UBERON:0009497,3.43e-07,25;UBERON:0000015,3.43e-07,25;UBERON:0002423,3.43e-07,25;UBERON:0006235,3.43e-07,25;UBERON:0004161,3.43e-07,25;UBERON:0001831,6.59e-07,1;UBERON:0001567,6.59e-07,1;UBERON:0008801,6.59e-07,1;UBERON:0009856,6.86e-07,26;UBERON:0002100,7.01e-07,199;UBERON:0004175,8.47e-07,25 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,0,0.737201809504527,2.79120467188971,1.09220686065086,1.84636884759917,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.157421562627358,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0.571994910780128,0,0,0,0,0.56530794192401,0,0.825354125820202,0,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0,0,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0,0,0.506522046658319,0.529636723252875,0.573673241497627,0.354668382198357,1.68203280042692,0,0.74000264525148,0,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0.910161361938026,0.718618141816238,0.505008341862199,0.125118519871964,0,0,0,0,0.113432183160021,0.717558542755448,0,0,0,0.103052529238439,0.257640540045629,0,0.843881661206331,0.584622030967192,0,0,0,0,0,0.508681776931463,0.386521706326594,0.818238361772504,0.573609190778008,0.121973706129595,0.397589304964456,0.232387885739037,0.310983165046111,0.504641701751257,0,0,0.643240938192885,0,0,0,0.473227200159376,0.674338760312407,0.723033089650446,0.441175890929576,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0,0,2.4694440679884,0,0,0,2.95394953340702,0.441463099414651,0.860919069801795,0,0.329250856225877,0,0.402115889646523,0.0925884451585296,0,0,0,0.115930404975077,0.587043471179108,0,0,0,0,0.858486162094873,0,0,0.148631162288728,0.93733833986777,2.01578553838631,0.567100388969546,0.179117045405697,0,0.383382679165211,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0.2933531432838,0.646358578788889,0,0.845302752556,0.531876233169741,0,0,0,0.532844358032199,0.714889968290738,0,0,0,0.710783897485092,0,0.301439377059586,2.61460037580088,0.299918973546171,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.356857977594324,0.473107245101804,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0,0.303127571446259,0,2.41912234663744,0.496215615637554,0.153461973288062,0.280660094433074,0,0,0.482561763430822,1.48418066444991,0.308419387605311,0.355123450626254,0.246381468041427,0.519254429183621,0.581051892299796,0.241718899183244,0.802025881213139,0,0.68888668898764,0,0.393373244878272,0,0.308061348417659,0.784349769176855,0,0,0,0.340187410553031,0.431831832204279,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0.256450125116389,0,0,0.206082023295445,0,0.082509499920588,0.574265537996172,0,1.6068392984416,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.145016693914229,0.255679882248303,0.623224249527161,0.165284915360978,0,0,0,0.464845549297286,0,0.6970372701606,0.308033580176089,0.532306030317022,0,0.55597265731176,0.143124886741991,0,0,0,0.511795582622668,0,0,0,0,1.09814811894422,0.353437207037059,1.2130948894399,1.58510321173008,0.421258456238981,0.975267478179181,0.243713489631284,0,0,0.282810863907425,0,0.551365343546124,0,0.438450885253763,1.15755106853338,0,0.202910376962704,1.239293992399,1.69017361519345,0.286822704408103,0,0.7133421029625,0,0,0,0,0,0.192444225451024,0,2.17781969722645,0.376575203107117,0.43050537267123,0,0,0.689170200620878,0,0,0,0,0,0,0,0,1.38871292465715,0,0.490080431962063,0,0.144269212976445,0,0,0.199579371432817,0.191505370132367,0,0,0,0.228234679033192,0.783399478865116,0,0.169291777801603,0,0.201799707191048,0.425846237690326,0,0.307240764308458,0.223676107892416,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0.755798243562828,0.306806047506464,0.123084805461069,0,0.359473404589307,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0.520855522170466,0.174919999992391,0,0.455173793141999,0,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0.0769502585037971,0,0.23056390438806,0.448788222048861,0.434589487688032,0,0.457987967009312,0.533034776018635,0,0,0.166211681900156,0,0.19606253431774,0.335643173951685,0,0,0,0.816164040795739,1.41353071433941,0,0,0.176915129006678,0,0.296521128680622,0.370691816839509,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0.569219092059585,0,1.04135843001079,0.195984794828755,0.0870592065804026,0,0.343972064943233,0.387025325156341,0.219267951258557,0.3284618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| 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| ||
|short_description=p8@SLC35C1 | |||
}} | }} |
Latest revision as of 01:25, 18 September 2015
Short description: | p8@SLC35C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC35C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 332bp_to_ENST00000540685_5end |
EntrezGene: | SLC35C1 |
HGNC: | 20197 |
UniProt: | Q96K20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 2.97e-11 | 2 |
epithelial cell of uterus | 3.61e-08 | 6 |
stromal cell of endometrium | 3.61e-08 | 6 |
smooth muscle cell of the coronary artery | 1.01e-07 | 3 |
hepatocyte | 3.17e-07 | 12 |
endodermal cell | 3.40e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.21e-11 | 2 |
exocrine gland | 7.55e-10 | 31 |
exocrine system | 7.55e-10 | 31 |
liver | 1.16e-09 | 19 |
digestive gland | 1.16e-09 | 19 |
liver bud | 1.16e-09 | 19 |
abdominal segment of trunk | 1.70e-08 | 60 |
abdomen | 1.70e-08 | 60 |
hepatic diverticulum | 2.94e-08 | 22 |
liver primordium | 2.94e-08 | 22 |
abdomen element | 5.13e-08 | 54 |
abdominal segment element | 5.13e-08 | 54 |
digestive tract diverticulum | 7.17e-08 | 23 |
coronary artery | 1.01e-07 | 3 |
mesenchyme | 1.66e-07 | 160 |
entire embryonic mesenchyme | 1.66e-07 | 160 |
trunk mesenchyme | 2.01e-07 | 122 |
epithelial sac | 3.43e-07 | 25 |
epithelium of foregut-midgut junction | 3.43e-07 | 25 |
anatomical boundary | 3.43e-07 | 25 |
hepatobiliary system | 3.43e-07 | 25 |
foregut-midgut junction | 3.43e-07 | 25 |
septum transversum | 3.43e-07 | 25 |
parotid gland | 6.59e-07 | 1 |
cheek | 6.59e-07 | 1 |
parotid gland primordium | 6.59e-07 | 1 |
sac | 6.86e-07 | 26 |
trunk | 7.01e-07 | 199 |
internal genitalia | 8.47e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 3.61e-08 | 6 |
islet cell tumor | 8.67e-07 | 1 |
endocrine pancreas cancer | 8.67e-07 | 1 |
pancreatic endocrine carcinoma | 8.67e-07 | 1 |