FFCP PHASE1:Hg19::chr6:31948210..31948243,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8859 | |EntrezGene=8859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11398 | |HGNC=11398 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_ENST00000490822_5end | |association_with_transcript=42bp_to_ENST00000490822_5end | ||
|cluster_id=chr6:31948210..31948243,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_6_at_STK19_5end | |description=CAGE_peak_6_at_STK19_5end | ||
|id=chr6:31948210..31948243,+ | |id=chr6:31948210..31948243,+ | ||
|ontology_enrichment_celltype=CL:0000181!4.68e-11!12;CL:0000417!4.68e-11!12;CL:0000668!4.68e-11!12;CL:0000414!4.68e-11!12;CL:0000412!4.68e-11!12;CL:0000182!4.68e-11!12 | |ontology_enrichment_celltype=CL:0000181!4.68e-11!12;CL:0000417!4.68e-11!12;CL:0000668!4.68e-11!12;CL:0000414!4.68e-11!12;CL:0000412!4.68e-11!12;CL:0000182!4.68e-11!12 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.93e-17;10!UBERON:0007687;6.93e-17;10!UBERON:0003104;1.07e-12;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.37e-10!19;UBERON:0006925!8.37e-10!19;UBERON:0008836!8.37e-10!19;UBERON:0008835!2.18e-08!22;UBERON:0003894!2.18e-08!22;UBERON:0005172!2.71e-08!55;UBERON:0005173!2.71e-08!55;UBERON:0009854!5.36e-08!23;UBERON:0007499!2.60e-07!25;UBERON:0009497!2.60e-07!25;UBERON:0000015!2.60e-07!25;UBERON:0002423!2.60e-07!25;UBERON:0006235!2.60e-07!25;UBERON:0004161!2.60e-07!25;UBERON:0002417!2.64e-07!61;UBERON:0000916!2.64e-07!61;UBERON:0005057!5.24e-07!26;UBERON:0009856!5.24e-07!26;UBERON:0002368!8.95e-07!35 | |ontology_enrichment_uberon=UBERON:0002107!8.37e-10!19;UBERON:0006925!8.37e-10!19;UBERON:0008836!8.37e-10!19;UBERON:0008835!2.18e-08!22;UBERON:0003894!2.18e-08!22;UBERON:0005172!2.71e-08!55;UBERON:0005173!2.71e-08!55;UBERON:0009854!5.36e-08!23;UBERON:0007499!2.60e-07!25;UBERON:0009497!2.60e-07!25;UBERON:0000015!2.60e-07!25;UBERON:0002423!2.60e-07!25;UBERON:0006235!2.60e-07!25;UBERON:0004161!2.60e-07!25;UBERON:0002417!2.64e-07!61;UBERON:0000916!2.64e-07!61;UBERON:0005057!5.24e-07!26;UBERON:0009856!5.24e-07!26;UBERON:0002368!8.95e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0005172;2.89e-10;52!UBERON:0005173;2.89e-10;52!UBERON:0002107;2.46e-09;19!UBERON:0006925;2.46e-09;19!UBERON:0002113;1.23e-07;24!UBERON:0011143;1.23e-07;24!UBERON:0002423;2.50e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,2.11e-12,54;UBERON:0005173,2.11e-12,54;UBERON:0002417,3.12e-11,60;UBERON:0000916,3.12e-11,60;UBERON:0002107,2.46e-09,19;UBERON:0006925,2.46e-09,19;UBERON:0008836,2.46e-09,19;UBERON:0008835,3.39e-08,22;UBERON:0003894,3.39e-08,22;UBERON:0009854,6.98e-08,23;UBERON:0007499,2.50e-07,25;UBERON:0009497,2.50e-07,25;UBERON:0000015,2.50e-07,25;UBERON:0002423,2.50e-07,25;UBERON:0006235,2.50e-07,25;UBERON:0004161,2.50e-07,25;UBERON:0002113,4.02e-07,26;UBERON:0003918,4.02e-07,26;UBERON:0011143,4.02e-07,26;UBERON:0005095,4.02e-07,26;UBERON:0007687,4.02e-07,26;UBERON:0009856,4.41e-07,26;UBERON:0005177,6.41e-07,101 | |||
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|short_description=p6@STK19 | |short_description=p6@STK19 | ||
}} | }} |
Latest revision as of 01:27, 18 September 2015
Short description: | p6@STK19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_STK19_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 42bp_to_ENST00000490822_5end |
EntrezGene: | STK19 |
HGNC: | 11398 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 2.11e-12 | 54 |
abdominal segment element | 2.11e-12 | 54 |
abdominal segment of trunk | 3.12e-11 | 60 |
abdomen | 3.12e-11 | 60 |
liver | 2.46e-09 | 19 |
digestive gland | 2.46e-09 | 19 |
liver bud | 2.46e-09 | 19 |
hepatic diverticulum | 3.39e-08 | 22 |
liver primordium | 3.39e-08 | 22 |
digestive tract diverticulum | 6.98e-08 | 23 |
epithelial sac | 2.50e-07 | 25 |
epithelium of foregut-midgut junction | 2.50e-07 | 25 |
anatomical boundary | 2.50e-07 | 25 |
hepatobiliary system | 2.50e-07 | 25 |
foregut-midgut junction | 2.50e-07 | 25 |
septum transversum | 2.50e-07 | 25 |
kidney | 4.02e-07 | 26 |
kidney mesenchyme | 4.02e-07 | 26 |
upper urinary tract | 4.02e-07 | 26 |
kidney rudiment | 4.02e-07 | 26 |
kidney field | 4.02e-07 | 26 |
sac | 4.41e-07 | 26 |
trunk region element | 6.41e-07 | 101 |