FFCP PHASE1:Hg19::chr13:78549648..78549669,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:78549648..78549669,- to FFCP PHASE1:Hg19::chr13:78549648..78549669,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1910 | |EntrezGene=1910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=3180 | |HGNC=3180 | ||
|TSSclassifier=strong | |||
|UniProt=P24530 | |UniProt=P24530 | ||
|association_with_transcript=0bp_to_NM_000115,uc001vkq.1_5end | |||
|cluster_id=chr13:78549648..78549669,- | |||
|description=CAGE_peak_6_at_EDNRB_5end | |||
|id=chr13:78549648..78549669,- | |||
|ontology_enrichment_celltype=CL:0002541!6.87e-15!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.59e-31;3!CL:0000349;9.18e-19;19!CL:0002563;8.74e-11;4!CL:0002537;5.28e-09;5!CL:0000039;9.38e-07;7!CL:0000586;9.38e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.60e-31,3;CL:0000349,9.47e-19,19;CL:0002563,8.53e-11,4;CL:0002537,5.49e-09,5;CL:0000039,9.38e-07,7;CL:0000586,9.38e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.78e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;8.62e-12;1!DOID:10165;8.62e-12;1!DOID:1798;8.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,8.62e-12,1;DOID:10165,8.62e-12,1;DOID:1798,8.62e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!7.95e-25!14;UBERON:0000158!7.95e-25!14;UBERON:0003124!4.24e-23!7;UBERON:0000476!6.87e-15!3;UBERON:0000920!6.87e-15!3;UBERON:0000478!8.97e-14!24;UBERON:0000988!5.48e-13!3;UBERON:0002298!1.30e-12!8;UBERON:0004733!9.78e-12!12;UBERON:0002028!9.78e-12!12;UBERON:0007277!9.78e-12!12;UBERON:0004732!8.64e-11!13;UBERON:0001987!1.43e-10!4;UBERON:0004340!1.43e-10!4;UBERON:0002148!2.19e-09!2;UBERON:0009662!2.19e-09!2;UBERON:0001875!2.39e-09!2;UBERON:0006514!2.39e-09!2;UBERON:0003076!2.82e-09!15;UBERON:0003057!2.82e-09!15;UBERON:0002308!1.27e-07!9;UBERON:0000125!1.27e-07!9;UBERON:0002680!1.72e-07!9;UBERON:0001895!1.72e-07!9;UBERON:0010092!1.72e-07!9;UBERON:0004923!2.16e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.59e-31;3!UBERON:0000920;1.59e-31;3!UBERON:0005631;2.00e-25;10!UBERON:0000158;2.00e-25;10!UBERON:0000478;6.04e-20;24!UBERON:0007195;2.42e-11;1!UBERON:0001987;7.72e-11;4!UBERON:0001242;8.74e-11;4!UBERON:0001262;8.74e-11;4!UBERON:0004786;8.74e-11;4!UBERON:0004808;8.74e-11;4!UBERON:0001277;8.74e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,5.09e-36,7;UBERON:0005631,1.38e-34,14;UBERON:0000158,1.38e-34,14;UBERON:0000920,1.60e-31,3;UBERON:0000478,6.21e-20,24;UBERON:0007195,2.18e-11,1;UBERON:0004923,4.06e-11,66;UBERON:0001987,7.72e-11,4;UBERON:0004340,7.72e-11,4;UBERON:0001242,8.53e-11,4;UBERON:0001262,8.53e-11,4;UBERON:0004786,8.53e-11,4;UBERON:0004808,8.53e-11,4;UBERON:0001277,8.53e-11,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,4.23008073570678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,4.05865624054073,11.8785872333055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,13.8338342632836,0,13.580921490251,25.5200927785536,21.5254344494376,25.5856692488945,0,0,0,0,0,0,0,0.794682894901893,0,0,2.96841450011276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.14929529049075,0,5.21235620992578,0.293104467356165,0,0.129282956361551,0.66116300871345,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.4288033377707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.00748724284847,0,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0.215927591218621,0,2.21577286947635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,4.23008073570678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63602642174982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,4.05865624054073,11.8785872333055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,13.8338342632836,0,13.580921490251,25.5200927785536,21.5254344494376,25.5856692488945,0,0,0,0,0,0,0,0.794682894901893,0,0,2.96841450011276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.14929529049075,0,5.21235620992578,0.293104467356165,0,0.129282956361551,0.66116300871345,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.4288033377707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.00748724284847,0,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0.215927591218621,0,2.21577286947635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@EDNRB | |||
}} | }} |
Latest revision as of 02:00, 18 September 2015
Short description: | p6@EDNRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EDNRB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_000115, uc001vkq.1_5end |
EntrezGene: | EDNRB |
HGNC: | 3180 |
UniProt: | P24530 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.60e-31 | 3 |
extraembryonic cell | 9.47e-19 | 19 |
intestinal epithelial cell | 8.53e-11 | 4 |
amnion mesenchymal stem cell | 5.49e-09 | 5 |
germ line cell | 9.38e-07 | 7 |
germ cell | 9.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
chorion | 5.09e-36 | 7 |
extraembryonic membrane | 1.38e-34 | 14 |
membranous layer | 1.38e-34 | 14 |
egg chorion | 1.60e-31 | 3 |
extraembryonic structure | 6.21e-20 | 24 |
stroma of bone marrow | 2.18e-11 | 1 |
organ component layer | 4.06e-11 | 66 |
placenta | 7.72e-11 | 4 |
allantois | 7.72e-11 | 4 |
intestinal mucosa | 8.53e-11 | 4 |
wall of intestine | 8.53e-11 | 4 |
gastrointestinal system mucosa | 8.53e-11 | 4 |
gastrointestinal system epithelium | 8.53e-11 | 4 |
intestinal epithelium | 8.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 8.62e-12 | 1 |
endocrine pancreas cancer | 8.62e-12 | 1 |
pancreatic endocrine carcinoma | 8.62e-12 | 1 |