FFCP PHASE1:Hg19::chr7:27224911..27224922,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3207 | |EntrezGene=3207 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5101 | |HGNC=5101 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-69bp_to_ENST00000517402,uc003syy.2_5end | |association_with_transcript=-69bp_to_ENST00000517402,uc003syy.2_5end | ||
|cluster_id=chr7:27224911..27224922,- | |||
|description=CAGE_peak_5_at_HOXA11_5end | |description=CAGE_peak_5_at_HOXA11_5end | ||
|id=chr7:27224911..27224922,- | |id=chr7:27224911..27224922,- | ||
|ontology_enrichment_celltype=CL:0002139!9.10e-09!24;CL:1000507!4.74e-08!12;CL:1000494!4.74e-08!12;CL:1000497!7.97e-08!18;CL:0002518!7.97e-08!18;CL:0002620!1.08e-07!23;CL:0000222!2.99e-07!119;CL:0002543!3.54e-07!6 | |ontology_enrichment_celltype=CL:0002139!9.10e-09!24;CL:1000507!4.74e-08!12;CL:1000494!4.74e-08!12;CL:1000497!7.97e-08!18;CL:0002518!7.97e-08!18;CL:0002620!1.08e-07!23;CL:0000222!2.99e-07!119;CL:0002543!3.54e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002543;4.75e-15;6!CL:0002139;8.31e-13;24!CL:0002138;7.71e-11;6!CL:0002521;2.29e-08;3!CL:0000115;5.32e-08;36!CL:0002618;5.80e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,1.41e-15,6;CL:0002139,7.73e-13,24;CL:0005020,1.25e-10,6;CL:0002138,1.25e-10,6;CL:0005022,1.25e-10,6;CL:0000115,4.22e-09,36;CL:0002521,1.24e-08,3;CL:0002618,3.36e-08,3 | |||
|ontology_enrichment_development_v019=CL:0005022;7.71e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006554!4.26e-15!44;UBERON:0001008!1.69e-14!45;UBERON:0000489!1.17e-09!32;UBERON:0002113!2.62e-09!27;UBERON:0003918!2.62e-09!27;UBERON:0005095!2.62e-09!27;UBERON:0007687!2.62e-09!27;UBERON:0003064!6.31e-09!37;UBERON:0009773!4.74e-08!12;UBERON:0001231!4.74e-08!12;UBERON:0004810!4.74e-08!12;UBERON:0001638!1.94e-07!9;UBERON:0003920!1.94e-07!9;UBERON:0004582!1.94e-07!9;UBERON:0006555!6.39e-07!17;UBERON:0005103!6.39e-07!17;UBERON:0000083!6.39e-07!17;UBERON:0009201!6.39e-07!17;UBERON:0004819!6.39e-07!17;UBERON:0006553!6.39e-07!17;UBERON:0003074!6.39e-07!17;UBERON:0003060!6.39e-07!17;UBERON:0000162!7.99e-07!14;UBERON:0001353!7.99e-07!14;UBERON:0000163!7.99e-07!14;UBERON:0006866!7.99e-07!14;UBERON:0000164!7.99e-07!14;UBERON:0000931!7.99e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001638;4.43e-13;9!UBERON:0003920;4.43e-13;9!UBERON:0004582;4.43e-13;9!UBERON:0010260;2.88e-09;9!UBERON:0002113;1.42e-08;24!UBERON:0011143;1.42e-08;24!UBERON:0002190;2.29e-08;3!UBERON:0002066;4.69e-08;5!UBERON:0001473;5.04e-08;8!UBERON:0004536;5.04e-08;8!UBERON:0006558;5.04e-08;8!UBERON:0006554;7.33e-08;30!UBERON:0001008;7.33e-08;30!UBERON:0000489;9.37e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001638,1.98e-13,9;UBERON:0003920,1.98e-13,9;UBERON:0004582,1.98e-13,9;UBERON:0010260,2.88e-09,9;UBERON:0002190,1.24e-08,3;UBERON:0002066,3.42e-08,5;UBERON:0002113,5.67e-08,26;UBERON:0003918,5.67e-08,26;UBERON:0011143,5.67e-08,26;UBERON:0005095,5.67e-08,26;UBERON:0007687,5.67e-08,26;UBERON:0001473,7.14e-08,8;UBERON:0004536,7.14e-08,8;UBERON:0006558,7.14e-08,8 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,1.0007329835313,0,0,2.53299878168311,1.89515962028049,1.30592814099919,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0.50133791063589,0.289693037921647,1.5905718941022,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835979866147242,1.03366703667732,1.06729878806013,0.66944122552934,0.805658634218294,0.760272105718513,0.24406205754817,1.10298924103761,0,1.16089646769304,1.57170560838319,1.68917220724983,1.53316637465883,2.84779697870439,2.74802615895611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0.587172493218824,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.640672166455702,0.423863802319124,0.600182192168805,1.03052529238439,0.515281080091258,1.11670113798954,0.337552664482532,1.16924406193438,0.252433774244115,0.184099797284599,0,1.06502877754984,1.41052937518696,1.3564847384839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,0.674338760312407,0.964044119533928,0.55146986366197,0.653638332277218,0.71181185733329,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46479474626577,2.77791307545966,1.71228737011138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0.904902010304444,0,0,1.86156681609409,2.08014873822732,2.31486636835928,0,1.3321108950805,0,3.25572963234866,0.823240336780769,0.977208552881205,0,0.791951872933429,0,0,0,0,0,0,0,0,4.27910715122155,0.289562613335158,1.2328579353023,0.358121926479791,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,0,0,0,0,0.601892199455438,0,0,1.99267679560631,0.553107505625109,1.30325421702124,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0,0,0.308419387605311,0,0.492762936082855,0,0.464841513839837,0,0.200506470303285,0.552485933615378,0.574072240823034,0.910455840033585,1.18011973463482,1.80479845162965,0.847168708148562,1.56869953835371,1.46139224653261,0.73886140225013,0,0.170093705276516,1.51141141271498,0,1.08378575017541,1.50506932156456,0.509752546090077,0.831076008928724,0.895499018888713,0,0,0,0,0,0.103041011647722,1.46511143709349,0.990113999047056,0,0.650060246036521,0,0.386682873168488,0,0,0.275673144969061,0.751941714077915,0.580066775656914,0,0.534192213880424,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.899362287916574,0.823611089208164,0.235624804691373,0,0,0,0.48763373908959,0.243713489631284,2.11300293513511,0.818999468447914,0.848432591722276,0,0,0,0,0,0,1.42037263873893,0.30982349809975,0.845086807596724,1.29070216983646,0.982490410131212,1.07001315444375,1.06428319221179,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0,1.22520107990516,0,0,0,0,0,0,0.635020748171649,0.324621940274555,0,0,0.626719583092093,2.50634477090067,0.50787533340481,0.321176150207399,0,0,0,0.307240764308458,0.447352215784832,1.50164227540718,1.75849285861836,0,0,0,0,0,1.49712432326576,0,0,0,0.568272293612826,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.716084698702437,0,0.591860433821602,0,0,0,0,0,0,0,0.724999575434793,1.2517279311405,0,0,3.79217710565611,0,0.694499979733169,0,0,0,0,0,0,0.435753854075961,0,1.38510465306835,0,0,0,0,0,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.442287822516696,0,0.296521128680622,0.494255755786011,0.417687798021821,0,0,0,0,0,0,0.394584402849391,0,0,0,1.35291077473043,2.17745201934219,0,0,0,0,0.569219092059585,0,0,0,0,0.34945333648406,1.20390222730132,0.774050650312681,0.803982487948041,0.574808199372465,0,0,0,0,0.993573058514948,0,0.195551382734803,0,0,0,1.15272333723285,0,1.71594997861965,0.720273989940749,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0.157611414598396,1.46872846777995,0.105600336519406,0.179287339332845,1.34340638123612,0,0,0,2.17199840701485,0,2.93928624098468,0,0,1.87426823963964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0.869526171664951,0.298509605773748,0.467426619694449,0.554805861502613,0.189403005275089,2.0125432140206,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.761610424337591,0,0,0.107410557042488,0,0.398095888698616,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0,0.782982875895635,0,0.231522474323834,0,0,0,0,0,0,0.337884881306145,0,0,0.607719912354764,0,0,0,0,0.327609848846413,0,0,0,0.213383459388282,0,0,1.10463570151104,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0.183428598521679,0,0.762764190934334,2.0710797781803,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.443511850813194,0,0,0,0,0.59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| ||
|short_description=p5@HOXA11 | |short_description=p5@HOXA11 | ||
}} | }} |
Latest revision as of 02:10, 18 September 2015
Short description: | p5@HOXA11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HOXA11_5end |
Coexpression cluster: | NA |
Association with transcript: | -69bp_to_ENST00000517402, uc003syy.2_5end |
EntrezGene: | HOXA11 |
HGNC: | 5101 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 1.41e-15 | 6 |
endothelial cell of vascular tree | 7.73e-13 | 24 |
lymphangioblast | 1.25e-10 | 6 |
endothelial cell of lymphatic vessel | 1.25e-10 | 6 |
vascular lymphangioblast | 1.25e-10 | 6 |
endothelial cell | 4.22e-09 | 36 |
subcutaneous fat cell | 1.24e-08 | 3 |
endothelial cell of umbilical vein | 3.36e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vein | 1.98e-13 | 9 |
venous blood vessel | 1.98e-13 | 9 |
venous system | 1.98e-13 | 9 |
umbilical blood vessel | 2.88e-09 | 9 |
subcutaneous adipose tissue | 1.24e-08 | 3 |
umbilical vein | 3.42e-08 | 5 |
kidney | 5.67e-08 | 26 |
kidney mesenchyme | 5.67e-08 | 26 |
upper urinary tract | 5.67e-08 | 26 |
kidney rudiment | 5.67e-08 | 26 |
kidney field | 5.67e-08 | 26 |
lymphatic vessel | 7.14e-08 | 8 |
lymph vasculature | 7.14e-08 | 8 |
lymphatic part of lymphoid system | 7.14e-08 | 8 |