FFCP PHASE1:Hg19::chr19:40971643..40971664,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:40971643..40971664,- to FFCP PHASE1:Hg19::chr19:40971643..40971664,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=645 | |EntrezGene=645 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1063 | |HGNC=1063 | ||
|TSSclassifier=strong | |||
|UniProt=P30043 | |UniProt=P30043 | ||
|association_with_transcript=60bp_to_ENST00000263368,NM_000713,uc002onw.2,uc010egw.1_5end | |||
|cluster_id=chr19:40971643..40971664,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_1_at_BLVRB_5end | |||
|id=chr19:40971643..40971664,- | |||
|ontology_enrichment_celltype=CL:0002194!1.45e-09!63;CL:0000576!1.45e-09!63;CL:0000040!1.45e-09!63;CL:0000559!1.45e-09!63;CL:0002009!3.54e-09!65;CL:0000839!3.60e-08!70;CL:0000860!3.91e-07!45 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.01e-09,59;CL:0000576,2.01e-09,59;CL:0000040,2.01e-09,59;CL:0000559,2.01e-09,59;CL:0000473,3.28e-09,48;CL:0000234,3.28e-09,48;CL:0002009,5.06e-09,61;CL:0000839,5.50e-08,66 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.41e-20!448;UBERON:0004120!3.41e-20!448;UBERON:0006603!3.41e-20!448;UBERON:0004119!1.26e-10!169;UBERON:0000925!1.26e-10!169;UBERON:0006595!1.26e-10!169;UBERON:0003081!1.81e-10!216;UBERON:0002390!6.32e-09!102;UBERON:0003061!6.32e-09!102;UBERON:0002193!1.42e-08!112;UBERON:0000077!3.28e-08!130;UBERON:0004921!8.45e-08!129;UBERON:0004185!8.45e-08!129;UBERON:0001004!8.76e-08!72;UBERON:0001007!1.15e-07!155;UBERON:0001555!1.15e-07!155;UBERON:0007026!1.15e-07!155;UBERON:0000468!2.51e-07!659;UBERON:0000467!5.56e-07!625;UBERON:0000065!6.48e-07!53;UBERON:0000480!8.44e-07!626;UBERON:0002371!9.96e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.43e-12,160;UBERON:0000925,3.43e-12,160;UBERON:0006595,3.43e-12,160;UBERON:0000926,1.18e-11,315;UBERON:0004120,1.18e-11,315;UBERON:0006603,1.18e-11,315;UBERON:0003081,1.88e-11,203;UBERON:0004921,2.36e-09,118;UBERON:0001007,7.01e-09,145;UBERON:0001555,7.01e-09,145;UBERON:0007026,7.01e-09,145;UBERON:0002390,1.05e-08,98;UBERON:0003061,1.05e-08,98;UBERON:0002193,2.39e-08,108;UBERON:0001041,2.90e-08,87;UBERON:0001004,1.06e-07,74;UBERON:0000065,5.21e-07,54 | |||
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| ||
|short_description=p1@BLVRB | |||
}} | }} |
Latest revision as of 02:11, 18 September 2015
Short description: | p1@BLVRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BLVRB_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 60bp_to_ENST00000263368, NM_000713, uc002onw.2, uc010egw.1_5end |
EntrezGene: | BLVRB |
HGNC: | 1063 |
UniProt: | P30043 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.01e-09 | 59 |
monocyte | 2.01e-09 | 59 |
monoblast | 2.01e-09 | 59 |
promonocyte | 2.01e-09 | 59 |
defensive cell | 3.28e-09 | 48 |
phagocyte | 3.28e-09 | 48 |
macrophage dendritic cell progenitor | 5.06e-09 | 61 |
myeloid lineage restricted progenitor cell | 5.50e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.43e-12 | 160 |
endoderm | 3.43e-12 | 160 |
presumptive endoderm | 3.43e-12 | 160 |
mesoderm | 1.18e-11 | 315 |
mesoderm-derived structure | 1.18e-11 | 315 |
presumptive mesoderm | 1.18e-11 | 315 |
lateral plate mesoderm | 1.88e-11 | 203 |
subdivision of digestive tract | 2.36e-09 | 118 |
digestive system | 7.01e-09 | 145 |
digestive tract | 7.01e-09 | 145 |
primitive gut | 7.01e-09 | 145 |
hematopoietic system | 1.05e-08 | 98 |
blood island | 1.05e-08 | 98 |
hemolymphoid system | 2.39e-08 | 108 |
foregut | 2.90e-08 | 87 |
respiratory system | 1.06e-07 | 74 |
respiratory tract | 5.21e-07 | 54 |