FFCP PHASE1:Hg19::chr1:160336929..160336938,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4807 | |EntrezGene=4807 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7817 | |HGNC=7817 | ||
|TSSclassifier=strong | |||
|UniProt=Q02575,Q5T203 | |UniProt=Q02575,Q5T203 | ||
|association_with_transcript=68bp_to_NM_005598,uc001fwa.2_5end | |association_with_transcript=68bp_to_NM_005598,uc001fwa.2_5end | ||
|cluster_id=chr1:160336929..160336938,+ | |||
|coexpression_cluster_id=C171 | |coexpression_cluster_id=C171 | ||
|description=CAGE_peak_2_at_NHLH1_5end | |description=CAGE_peak_2_at_NHLH1_5end | ||
|id=chr1:160336929..160336938,+ | |id=chr1:160336929..160336938,+ | ||
|ontology_enrichment_celltype=CL:0000123;5.68e-99;2!CL:0000242;5.68e-99;2!CL:0000312;1.81e-40;5!CL:0000240;5.98e-34;6!CL:0000311;5.98e-34;6!CL:0000079;5.98e-34;6!CL:0000237;5.98e-34;6!CL:0000362;4.59e-23;9!CL:0002159;2.95e-15;14!CL:0000095;1.55e-11;17!CL:0000333;3.26e-11;5!CL:0002319;1.98e-08;25 | |ontology_enrichment_celltype=CL:0000242!3.44e-25!2;CL:0002319!2.17e-15!25;CL:0000133!1.61e-11!59;CL:0000312!1.16e-10!5;CL:0000095!3.31e-10!17;CL:0000123!3.31e-10!17;CL:0000333!1.56e-09!41;CL:0000221!1.75e-09!71;CL:0000240!4.94e-09!6;CL:0000311!4.94e-09!6;CL:0000079!4.94e-09!6;CL:0000237!4.94e-09!6;CL:0000036!4.94e-09!6;CL:0000357!4.94e-09!6;CL:0000114!4.94e-09!6;CL:1000487!5.28e-07!2;CL:0000362!5.54e-07!8;CL:0000047!8.12e-07!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000123;5.68e-99;2!CL:0000242;5.68e-99;2!CL:0000312;1.81e-40;5!CL:0000240;5.98e-34;6!CL:0000311;5.98e-34;6!CL:0000079;5.98e-34;6!CL:0000237;5.98e-34;6!CL:0000362;4.59e-23;9!CL:0002159;2.95e-15;14!CL:0000095;1.55e-11;17!CL:0000333;3.26e-11;5!CL:0002319;1.98e-08;25 | ||
|ontology_enrichment_disease=DOID:169;1.44e-09;6 | |ontology_enrichment_celltype_v019_2=CL:0000242,5.68e-99,2;CL:0000312,1.81e-40,5;CL:0000240,5.98e-34,6;CL:0000311,5.98e-34,6;CL:0000079,5.98e-34,6;CL:0000237,5.98e-34,6;CL:0000036,5.98e-34,6;CL:0000357,5.98e-34,6;CL:0000114,5.98e-34,6;CL:0000362,4.59e-23,9;CL:0002159,2.95e-15,14;CL:0000095,1.55e-11,17;CL:0000123,1.55e-11,17;CL:0000333,2.75e-11,41;CL:0002319,1.98e-08,25;CL:0000133,3.25e-08,59;CL:0000221,6.51e-07,72;CL:0002077,6.75e-07,34 | ||
|ontology_enrichment_uberon=UBERON:0001003;2.58e-14;15!UBERON:0007376;2.58e-14;15!UBERON:0000013;3.26e-11;5!UBERON:0002410;3.26e-11;5!UBERON:0001871;2.35e-08;6!UBERON:0010371;3.37e-07;31!UBERON:0000010;8.37e-07;8 | |ontology_enrichment_development_v019=CL:0000357;5.98e-34;6!CL:0000114;5.98e-34;6 | ||
|ontology_enrichment_disease=DOID:3119!4.94e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:169;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.44e-09,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;2.58e-14;15!UBERON:0007376;2.58e-14;15!UBERON:0000013;3.26e-11;5!UBERON:0002410;3.26e-11;5!UBERON:0001871;2.35e-08;6!UBERON:0010371;3.37e-07;31!UBERON:0000010;8.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,2.58e-14,15;UBERON:0007376,2.58e-14,15;UBERON:0007383,2.58e-14,15;UBERON:0000013,3.26e-11,5;UBERON:0002410,3.26e-11,5;UBERON:0001871,2.35e-08,6;UBERON:0000010,8.37e-07,8 | |||
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|short_description=p2@NHLH1 | |short_description=p2@NHLH1 | ||
}} | }} |
Latest revision as of 02:18, 18 September 2015
Short description: | p2@NHLH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NHLH1_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | 68bp_to_NM_005598, uc001fwa.2_5end |
EntrezGene: | NHLH1 |
HGNC: | 7817 |
UniProt: | Q02575Q5T203 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.68e-99 | 2 |
keratinocyte | 1.81e-40 | 5 |
stratified squamous epithelial cell | 5.98e-34 | 6 |
keratin accumulating cell | 5.98e-34 | 6 |
stratified epithelial cell | 5.98e-34 | 6 |
keratinizing barrier epithelial cell | 5.98e-34 | 6 |
epithelial fate stem cell | 5.98e-34 | 6 |
stratified epithelial stem cell | 5.98e-34 | 6 |
surface ectodermal cell | 5.98e-34 | 6 |
epidermal cell | 4.59e-23 | 9 |
general ecto-epithelial cell | 2.95e-15 | 14 |
neuron associated cell | 1.55e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.55e-11 | 17 |
migratory neural crest cell | 2.75e-11 | 41 |
neural cell | 1.98e-08 | 25 |
neurectodermal cell | 3.25e-08 | 59 |
ectodermal cell | 6.51e-07 | 72 |
ecto-epithelial cell | 6.75e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 2.58e-14 | 15 |
outer epithelium | 2.58e-14 | 15 |
enveloping layer of ectoderm | 2.58e-14 | 15 |
sympathetic nervous system | 3.26e-11 | 5 |
autonomic nervous system | 3.26e-11 | 5 |
temporal lobe | 2.35e-08 | 6 |
peripheral nervous system | 8.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.44e-09 | 6 |