FFCP PHASE1:Hg19::chr5:52084059..52084086,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3672 | |EntrezGene=3672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6134 | |HGNC=6134 | ||
|TSSclassifier=strong | |||
|UniProt=P56199 | |UniProt=P56199 | ||
|association_with_transcript=-49bp_to_NM_181501_5end | |association_with_transcript=-49bp_to_NM_181501_5end | ||
|cluster_id=chr5:52084059..52084086,+ | |||
|coexpression_cluster_id=C1277 | |coexpression_cluster_id=C1277 | ||
|description=CAGE_peak_4_at_ITGA1_5end | |description=CAGE_peak_4_at_ITGA1_5end | ||
|id=chr5:52084059..52084086,+ | |id=chr5:52084059..52084086,+ | ||
|ontology_enrichment_celltype=CL:0000136!8.84e-09!15;CL:0000055!2.62e-07!180 | |ontology_enrichment_celltype=CL:0000136!8.84e-09!15;CL:0000055!2.62e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.66e-10;13!CL:0000182;3.89e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.25e-10,15;CL:0000182,4.18e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.73e-14!659;UBERON:0000477!1.83e-13!286;UBERON:0007023!2.61e-13!115;UBERON:0000481!8.31e-13!347;UBERON:0000475!8.18e-12!365;UBERON:0000467!2.42e-11!625;UBERON:0000480!3.85e-11!626;UBERON:0003914!3.25e-10!118;UBERON:0004111!7.61e-10!241;UBERON:0005256!1.22e-09!143;UBERON:0002100!1.64e-09!216;UBERON:0003104!2.02e-09!238;UBERON:0009142!2.02e-09!238;UBERON:0000025!3.30e-09!194;UBERON:0002107!6.08e-09!19;UBERON:0006925!6.08e-09!19;UBERON:0008836!6.08e-09!19;UBERON:0000490!1.74e-08!138;UBERON:0000119!1.92e-08!312;UBERON:0009856!2.14e-08!26;UBERON:0009854!3.95e-08!23;UBERON:0000483!4.21e-08!309;UBERON:0007499!6.28e-08!25;UBERON:0001048!1.07e-07!168;UBERON:0008835!1.18e-07!22;UBERON:0003894!1.18e-07!22;UBERON:0005057!1.36e-07!26;UBERON:0002368!3.19e-07!35;UBERON:0000062!3.81e-07!511;UBERON:0002417!4.55e-07!61;UBERON:0000916!4.55e-07!61;UBERON:0009497!5.52e-07!25;UBERON:0000015!5.52e-07!25;UBERON:0002423!5.52e-07!25;UBERON:0006235!5.52e-07!25;UBERON:0004161!5.52e-07!25;UBERON:0007100!6.65e-07!27 | |ontology_enrichment_uberon=UBERON:0000468!1.73e-14!659;UBERON:0000477!1.83e-13!286;UBERON:0007023!2.61e-13!115;UBERON:0000481!8.31e-13!347;UBERON:0000475!8.18e-12!365;UBERON:0000467!2.42e-11!625;UBERON:0000480!3.85e-11!626;UBERON:0003914!3.25e-10!118;UBERON:0004111!7.61e-10!241;UBERON:0005256!1.22e-09!143;UBERON:0002100!1.64e-09!216;UBERON:0003104!2.02e-09!238;UBERON:0009142!2.02e-09!238;UBERON:0000025!3.30e-09!194;UBERON:0002107!6.08e-09!19;UBERON:0006925!6.08e-09!19;UBERON:0008836!6.08e-09!19;UBERON:0000490!1.74e-08!138;UBERON:0000119!1.92e-08!312;UBERON:0009856!2.14e-08!26;UBERON:0009854!3.95e-08!23;UBERON:0000483!4.21e-08!309;UBERON:0007499!6.28e-08!25;UBERON:0001048!1.07e-07!168;UBERON:0008835!1.18e-07!22;UBERON:0003894!1.18e-07!22;UBERON:0005057!1.36e-07!26;UBERON:0002368!3.19e-07!35;UBERON:0000062!3.81e-07!511;UBERON:0002417!4.55e-07!61;UBERON:0000916!4.55e-07!61;UBERON:0009497!5.52e-07!25;UBERON:0000015!5.52e-07!25;UBERON:0002423!5.52e-07!25;UBERON:0006235!5.52e-07!25;UBERON:0004161!5.52e-07!25;UBERON:0007100!6.65e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.14e-11;19!UBERON:0006925;3.14e-11;19!UBERON:0002368;1.18e-09;33!UBERON:0002423;3.93e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.28e-11,19;UBERON:0006925,3.28e-11,19;UBERON:0008836,3.28e-11,19;UBERON:0005256,3.96e-11,122;UBERON:0002100,4.06e-11,199;UBERON:0003104,7.81e-11,160;UBERON:0009142,7.81e-11,160;UBERON:0007023,2.21e-10,114;UBERON:0002417,6.12e-10,60;UBERON:0000916,6.12e-10,60;UBERON:0003914,6.70e-10,117;UBERON:0009569,7.92e-10,112;UBERON:0009854,1.77e-09,23;UBERON:0002368,3.47e-09,35;UBERON:0008835,7.62e-09,22;UBERON:0003894,7.62e-09,22;UBERON:0009856,8.12e-09,26;UBERON:0001048,9.81e-09,160;UBERON:0007499,3.26e-08,25;UBERON:0009497,4.22e-08,25;UBERON:0000015,4.22e-08,25;UBERON:0002423,4.22e-08,25;UBERON:0006235,4.22e-08,25;UBERON:0004161,4.22e-08,25;UBERON:0004921,6.23e-08,118;UBERON:0000490,1.46e-07,148;UBERON:0001007,1.68e-07,145;UBERON:0001555,1.68e-07,145;UBERON:0007026,1.68e-07,145;UBERON:0005172,5.93e-07,54;UBERON:0005173,5.93e-07,54 | |||
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| ||
|short_description=p4@ITGA1 | |short_description=p4@ITGA1 | ||
}} | }} |
Latest revision as of 02:21, 18 September 2015
Short description: | p4@ITGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGA1_5end |
Coexpression cluster: | C1277_Hepatocyte_mature_mesenchymal_smooth_bladder_normal_cholangiocellular |
Association with transcript: | -49bp_to_NM_181501_5end |
EntrezGene: | ITGA1 |
HGNC: | 6134 |
UniProt: | P56199 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.25e-10 | 15 |
hepatocyte | 4.18e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.28e-11 | 19 |
digestive gland | 3.28e-11 | 19 |
liver bud | 3.28e-11 | 19 |
trunk mesenchyme | 3.96e-11 | 122 |
trunk | 4.06e-11 | 199 |
mesenchyme | 7.81e-11 | 160 |
entire embryonic mesenchyme | 7.81e-11 | 160 |
adult organism | 2.21e-10 | 114 |
abdominal segment of trunk | 6.12e-10 | 60 |
abdomen | 6.12e-10 | 60 |
epithelial tube | 6.70e-10 | 117 |
subdivision of trunk | 7.92e-10 | 112 |
digestive tract diverticulum | 1.77e-09 | 23 |
endocrine gland | 3.47e-09 | 35 |
hepatic diverticulum | 7.62e-09 | 22 |
liver primordium | 7.62e-09 | 22 |
sac | 8.12e-09 | 26 |
primordium | 9.81e-09 | 160 |
epithelial sac | 3.26e-08 | 25 |
epithelium of foregut-midgut junction | 4.22e-08 | 25 |
anatomical boundary | 4.22e-08 | 25 |
hepatobiliary system | 4.22e-08 | 25 |
foregut-midgut junction | 4.22e-08 | 25 |
septum transversum | 4.22e-08 | 25 |
subdivision of digestive tract | 6.23e-08 | 118 |
unilaminar epithelium | 1.46e-07 | 148 |
digestive system | 1.68e-07 | 145 |
digestive tract | 1.68e-07 | 145 |
primitive gut | 1.68e-07 | 145 |
abdomen element | 5.93e-07 | 54 |
abdominal segment element | 5.93e-07 | 54 |