FFCP PHASE1:Hg19::chr2:170655351..170655405,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=6741 | |EntrezGene=6741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=11316 | |HGNC=11316 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=E9PFH8,E9PFL9,E9PGX9 | |UniProt=E9PFH8,E9PFL9,E9PGX9 | ||
|association_with_transcript=0bp_to_ENST00000409005,ENST00000413002,ENST00000417292,ENST00000461708,uc002ufk.2,uc002ufl.2_5end | |association_with_transcript=0bp_to_ENST00000409005,ENST00000413002,ENST00000417292,ENST00000461708,uc002ufk.2,uc002ufl.2_5end | ||
|cluster_id=chr2:170655351..170655405,+ | |||
|description=CAGE_peak_1_at_SSB_5end | |description=CAGE_peak_1_at_SSB_5end | ||
|id=chr2:170655351..170655405,+ | |id=chr2:170655351..170655405,+ |
Latest revision as of 02:39, 18 September 2015
Short description: | p1@SSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SSB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409005, ENST00000413002, ENST00000417292, ENST00000461708, uc002ufk.2, uc002ufl.2_5end |
EntrezGene: | SSB |
HGNC: | 11316 |
UniProt: | E9PFH8E9PFL9E9PGX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SSB |
---|
0
100
200
300
400
500
600
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 3.19e-33 | 235 |
disease of cellular proliferation | 1.10e-31 | 239 |
cell type cancer | 5.32e-20 | 143 |
organ system cancer | 1.63e-18 | 137 |
carcinoma | 1.47e-15 | 106 |
myeloid leukemia | 2.02e-12 | 31 |
hematologic cancer | 2.78e-12 | 51 |
immune system cancer | 2.78e-12 | 51 |
leukemia | 4.85e-12 | 39 |
Showing 1 to 9 of 9 entries