FFCP PHASE1:Hg19::chr19:41257127..41257156,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:41257127..41257156,+ to FFCP PHASE1:Hg19::chr19:41257127..41257156,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6626 | |EntrezGene=6626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11151 | |HGNC=11151 | ||
|TSSclassifier=strong | |||
|UniProt=B4DDC7 | |UniProt=B4DDC7 | ||
|association_with_transcript=1bp_to_ENST00000545469_5end | |||
|cluster_id=chr19:41257127..41257156,+ | |||
|description=CAGE_peak_2_at_SNRPA_5end | |||
|id=chr19:41257127..41257156,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.82e-15!679;CL:0000004!2.82e-15!679;CL:0000255!2.82e-15!679;CL:0000012!4.51e-15!682;CL:0002321!4.43e-13!248;CL:0000220!1.32e-12!246;CL:0000066!7.50e-12!254;CL:0000003!5.88e-10!722;CL:0000144!6.03e-09!625;CL:0000221!2.06e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:1000449;9.55e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.92e-13,250;CL:0000066,3.83e-12,253;CL:0000221,3.31e-07,72;CL:0000115,5.71e-07,36;CL:1000449,9.35e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.35e-22!235;DOID:14566!1.29e-21!239;DOID:2531!6.06e-18!51;DOID:0060083!6.06e-18!51;DOID:1240!6.67e-16!39;DOID:8692!6.70e-14!31;DOID:0050686!3.53e-11!137;DOID:0050687!5.25e-08!143;DOID:3095!5.82e-07!22;DOID:2994!5.82e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.41e-13;31!DOID:1240;8.53e-13;39!DOID:2531;2.55e-11;51!DOID:0060083;2.55e-11;51!DOID:3095;6.15e-07;22!DOID:2994;6.15e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.35e-22,235;DOID:14566,1.29e-21,239;DOID:2531,6.06e-18,51;DOID:0060083,6.06e-18,51;DOID:1240,6.67e-16,39;DOID:8692,6.70e-14,31;DOID:0050686,3.53e-11,137;DOID:0050687,5.25e-08,143;DOID:3095,5.82e-07,22;DOID:2994,5.82e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;9.55e-07;15!UBERON:0004819;9.55e-07;15!UBERON:0001285;9.55e-07;15!UBERON:0007684;9.55e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,9.35e-07,15;UBERON:0009773,9.35e-07,15;UBERON:0001231,9.35e-07,15;UBERON:0001285,9.35e-07,15;UBERON:0007684,9.35e-07,15;UBERON:0004208,9.35e-07,15 | |||
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| ||
|short_description=p2@SNRPA | |||
}} | }} |
Latest revision as of 02:55, 18 September 2015
Short description: | p2@SNRPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNRPA_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000545469_5end |
EntrezGene: | SNRPA |
HGNC: | 11151 |
UniProt: | B4DDC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.92e-13 | 250 |
epithelial cell | 3.83e-12 | 253 |
ectodermal cell | 3.31e-07 | 72 |
endothelial cell | 5.71e-07 | 36 |
epithelial cell of nephron | 9.35e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 9.35e-07 | 15 |
renal tubule | 9.35e-07 | 15 |
nephron tubule | 9.35e-07 | 15 |
nephron | 9.35e-07 | 15 |
uriniferous tubule | 9.35e-07 | 15 |
nephrogenic mesenchyme | 9.35e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.35e-22 | 235 |
disease of cellular proliferation | 1.29e-21 | 239 |
hematologic cancer | 6.06e-18 | 51 |
immune system cancer | 6.06e-18 | 51 |
leukemia | 6.67e-16 | 39 |
myeloid leukemia | 6.70e-14 | 31 |
organ system cancer | 3.53e-11 | 137 |
cell type cancer | 5.25e-08 | 143 |
germ cell and embryonal cancer | 5.82e-07 | 22 |
germ cell cancer | 5.82e-07 | 22 |