FFCP PHASE1:Hg19::chr1:43148792..43148849,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4904 | |EntrezGene=4904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8014 | |HGNC=8014 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000467957_5end | |association_with_transcript=0bp_to_ENST00000467957_5end | ||
|cluster_id=chr1:43148792..43148849,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_2_at_YBX1_5end | |description=CAGE_peak_2_at_YBX1_5end | ||
|id=chr1:43148792..43148849,+ | |id=chr1:43148792..43148849,+ | ||
|ontology_enrichment_celltype=CL:0000222!5.31e-07!119 | |ontology_enrichment_celltype=CL:0000222!5.31e-07!119 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.20e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.43e-08!110;UBERON:0000055!2.57e-08!69;UBERON:0001009!1.01e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,9.05e-09,109;UBERON:0000055,1.08e-08,68;UBERON:0001009,6.29e-08,112;UBERON:0007500,5.90e-07,59;UBERON:0001981,5.90e-07,59;UBERON:0004537,5.90e-07,59;UBERON:0006965,5.90e-07,59;UBERON:0002049,7.21e-07,78;UBERON:0007798,7.21e-07,78 | |||
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| ||
|short_description=p2@YBX1 | |short_description=p2@YBX1 | ||
}} | }} |
Latest revision as of 03:30, 18 September 2015
Short description: | p2@YBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_YBX1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000467957_5end |
EntrezGene: | YBX1 |
HGNC: | 8014 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.20e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 9.05e-09 | 109 |
vessel | 1.08e-08 | 68 |
circulatory system | 6.29e-08 | 112 |
epithelial tube open at both ends | 5.90e-07 | 59 |
blood vessel | 5.90e-07 | 59 |
blood vasculature | 5.90e-07 | 59 |
vascular cord | 5.90e-07 | 59 |
vasculature | 7.21e-07 | 78 |
vascular system | 7.21e-07 | 78 |