FFCP PHASE1:Hg19::chr12:32259684..32259692,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=636 | |EntrezGene=636 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1049 | |HGNC=1049 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-76bp_to_ENST00000551848_5end | |association_with_transcript=-76bp_to_ENST00000551848_5end | ||
|cluster_id=chr12:32259684..32259692,+ | |||
|description=CAGE_peak_8_at_BICD1_5end | |description=CAGE_peak_8_at_BICD1_5end | ||
|id=chr12:32259684..32259692,+ | |id=chr12:32259684..32259692,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.65e-24;7!CL:0000586;4.65e-24;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.84e-24,7;CL:0000586,4.84e-24,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.59e-17;10!UBERON:0005564;4.59e-17;10 | |||
|ontology_enrichment_disease=DOID:0050686!2.30e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.28e-08;22!DOID:2994;4.28e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.34e-08,22;DOID:2994,4.34e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.76e-08!94;UBERON:0001016!3.76e-08!94;UBERON:0005743!2.00e-07!86;UBERON:0001017!3.42e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.79e-21;8!UBERON:0003135;1.41e-15;11!UBERON:0000922;4.61e-09;49!UBERON:0000991;1.87e-08;21!UBERON:0003101;4.28e-08;22!UBERON:0000079;4.28e-08;22!UBERON:0002114;2.71e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.92e-21,8;UBERON:0003135,1.45e-15,11;UBERON:0000991,1.90e-08,21;UBERON:0009196,1.90e-08,21;UBERON:0009117,1.90e-08,21;UBERON:0005564,1.90e-08,21;UBERON:0004176,4.34e-08,22;UBERON:0003101,4.34e-08,22;UBERON:0000079,4.34e-08,22;UBERON:0002114,2.63e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0.232401601740905,0.426507697462265,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0,1.1384259382189,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0.473447805734733,0,0.668462741311041,0,0.221533894583621,0.270803863765016,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,1.04535523804977,0.453237370790265,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0.673588117878509,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0.560677600142307,0,0,0,0.269421344139376,0,0,0.576175924479999,0,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.662648841607426,0.813357600086629,0.725627385107593,0.252320850875628,1.82488679537915,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.335032530668698,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0,0,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.165018999841176,0,0.650060246036521,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0.318852545457645,0.199579371432817,0.191505370132367,0.846694330895531,0.324621940274555,0,0,0.156679895773023,0,0.338583555603207,0,0.201799707191048,0,0,0.307240764308458,0.671028323677248,0.834245708559542,0.19538809540204,0,0,0.540911356951966,0.66614393599564,0,0,0,0.849523652246594,0.222886768554957,0,0,0,0,0,0.422008249231538,0,0.16480387422676,0.211125408127993,0,0.552567831062295,0,0.20453736500431,0.246169610922139,0,0.269605053441981,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0.508507300585533,0,0,0,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0.10893846351899,0.139423744278603,0.230850775511391,0,0.69169171316418,0.0897576444097721,0,0,0.0915975934018623,0,0,0.470940769185074,0,0,0,0.503464760927528,0,0,0.632994193584081,0.489698424477443,0.141353071433941,0.216388639742091,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0.269604531922708,0,0,0.729819156862664,0.391329237864179,0.242780379534093,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0.941798755221676,0,0,0.554698692052555,0.173559738335131,0.0979923974143777,0,0.34945333648406,0,0.19351266257817,0,0.164230914106418,0.0969890164884194,0.353024506766001,0,0,0.397429223405979,0.759729551470544,0,0.320635281006135,0.213452994739353,0.19980960958213,0.288180834308212,0.687219576995494,0,0,0,0,0.271808412147228,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,2.32991899054908,0.0787831823072236,0.164831716762333,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0.681017030557878,0.482259445395058,1.51293380256957,0.415440338029185,0,0,0.425246896606173,0,0.0788057072991982,0.104909176269996,0.528001682597033,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0.342173675768659,0.704815022316672,0.106787412567695,0,0.414239055347196,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0.785270481251171,0,0.366078794705889,0.250381861413,0,0.221858103073705,0.496771223531068,0.553394539744923,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0.639471856518258,0.431299245586727,0,0,0.33946505990805,0.212574920101683,0,0.558644917973244,0,0,0,0,0.6124909547064,0.321146125482298,0,0,0.615349092722265,0,0.138314504928436,0.484426936895553,0,0.196295437002051,0,0,0,0,0,0,0.225630985047772,0,0,0.261906694481422,0,0,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,0,0.175871244359621,0,0,0,0,0.455324382702595,0,0.115233987555779,0,0.203909198930495,0.197318320688547,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0.215927591218621,0,0.428859265059938,0.94808167039636,0.116241425368125,0,0,0,0,0,0,0.354996002191696,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0.392600934460972,0,0,0,1.1598144313382,0,0.467878926924211,0.198950775161368,0.356760272332706,0.22589216407792,0.879524133963433,0.150962843566674,0.308696632431779,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0.187967835959707,0,0.199882311849858,0.178553938605658,0,0.240724100067505,0,0.458729283404541,0,0,0.203974470572744,1.30905207102113,0,0,0,0,0.756998549010474,0.437062287854782,0,0.917899467677836,3.74104367371785,3.03253168464988,1.25353769646188,0,0,0,0.103432995861895,0,0,0.129177819672012,0.558672428662721,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0,0,0.426909383510862,0,0.359300808426348,0,0,0,0,0.402547587182052,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0.232401601740905,0.426507697462265,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0,1.1384259382189,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0.473447805734733,0,0.668462741311041,0,0.221533894583621,0.270803863765016,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,1.04535523804977,0.453237370790265,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0.673588117878509,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0.560677600142307,0,0,0,0.269421344139376,0,0,0.576175924479999,0,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.662648841607426,0.813357600086629,0.725627385107593,0.252320850875628,1.82488679537915,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.335032530668698,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0,0,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.165018999841176,0,0.650060246036521,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0.318852545457645,0.199579371432817,0.191505370132367,0.846694330895531,0.324621940274555,0,0,0.156679895773023,0,0.338583555603207,0,0.201799707191048,0,0,0.307240764308458,0.671028323677248,0.834245708559542,0.19538809540204,0,0,0.540911356951966,0.66614393599564,0,0,0,0.849523652246594,0.222886768554957,0,0,0,0,0,0.422008249231538,0,0.16480387422676,0.211125408127993,0,0.552567831062295,0,0.20453736500431,0.246169610922139,0,0.269605053441981,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0.508507300585533,0,0,0,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0.10893846351899,0.139423744278603,0.230850775511391,0,0.69169171316418,0.0897576444097721,0,0,0.0915975934018623,0,0,0.470940769185074,0,0,0,0.503464760927528,0,0,0.632994193584081,0.489698424477443,0.141353071433941,0.216388639742091,0,0,0,0.296521128680622,0.247127877893006,0.104421949505455,0.269604531922708,0,0,0.729819156862664,0.391329237864179,0.242780379534093,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0.941798755221676,0,0,0.554698692052555,0.173559738335131,0.0979923974143777,0,0.34945333648406,0,0.19351266257817,0,0.164230914106418,0.0969890164884194,0.353024506766001,0,0,0.397429223405979,0.759729551470544,0,0.320635281006135,0.213452994739353,0.19980960958213,0.288180834308212,0.687219576995494,0,0,0,0,0.271808412147228,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,2.32991899054908,0.0787831823072236,0.164831716762333,0.0674035438541849,0.0984274815147488,0.0846733320657845,0,0.681017030557878,0.482259445395058,1.51293380256957,0.415440338029185,0,0,0.425246896606173,0,0.0788057072991982,0.104909176269996,0.528001682597033,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0.342173675768659,0.704815022316672,0.106787412567695,0,0.414239055347196,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0.785270481251171,0,0.366078794705889,0.250381861413,0,0.221858103073705,0.496771223531068,0.553394539744923,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0.639471856518258,0.431299245586727,0,0,0.33946505990805,0.212574920101683,0,0.558644917973244,0,0,0,0,0.6124909547064,0.321146125482298,0,0,0.615349092722265,0,0.138314504928436,0.484426936895553,0,0.196295437002051,0,0,0,0,0,0,0.225630985047772,0,0,0.261906694481422,0,0,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,0,0.175871244359621,0,0,0,0,0.455324382702595,0,0.115233987555779,0,0.203909198930495,0.197318320688547,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0.215927591218621,0,0.428859265059938,0.94808167039636,0.116241425368125,0,0,0,0,0,0,0.354996002191696,0.0852134047591577,0,0.22910686854405,0.31020638566432,0,0,0.392600934460972,0,0,0,1.1598144313382,0,0.467878926924211,0.198950775161368,0.356760272332706,0.22589216407792,0.879524133963433,0.150962843566674,0.308696632431779,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0.187967835959707,0,0.199882311849858,0.178553938605658,0,0.240724100067505,0,0.458729283404541,0,0,0.203974470572744,1.30905207102113,0,0,0,0,0.756998549010474,0.437062287854782,0,0.917899467677836,3.74104367371785,3.03253168464988,1.25353769646188,0,0,0,0.103432995861895,0,0,0.129177819672012,0.558672428662721,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0,0,0.426909383510862,0,0.359300808426348,0,0,0,0,0.402547587182052,0 | ||
|short_description=p8@BICD1 | |short_description=p8@BICD1 | ||
}} | }} |
Latest revision as of 04:33, 18 September 2015
Short description: | p8@BICD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_BICD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_ENST00000551848_5end |
EntrezGene: | BICD1 |
HGNC: | 1049 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.84e-24 | 7 |
germ cell | 4.84e-24 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.92e-21 | 8 |
male reproductive organ | 1.45e-15 | 11 |
gonad | 1.90e-08 | 21 |
indifferent external genitalia | 1.90e-08 | 21 |
indifferent gonad | 1.90e-08 | 21 |
gonad primordium | 1.90e-08 | 21 |
external genitalia | 4.34e-08 | 22 |
male organism | 4.34e-08 | 22 |
male reproductive system | 4.34e-08 | 22 |
duodenum | 2.63e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.34e-08 | 22 |
germ cell cancer | 4.34e-08 | 22 |