FFCP PHASE1:Hg19::chr8:38831717..38831728,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203100 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26909 | |||
|TSSclassifier=strong | |||
|UniProt=P83105 | |||
|association_with_transcript=34bp_to_ENST00000302495_5end | |||
|cluster_id=chr8:38831717..38831728,+ | |||
|coexpression_cluster_id=C4753 | |||
|description=CAGE_peak_5_at_HTRA4_5end | |||
|id=chr8:38831717..38831728,+ | |||
|ontology_enrichment_celltype=CL:0002541!3.38e-17!3;CL:0000235!3.74e-09!10;CL:0002586!2.57e-08!3;CL:0000839!4.40e-07!70;CL:0000557!5.88e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.42e-33;6!CL:0002541;2.67e-30;3!CL:0002097;2.74e-12;2!CL:0000174;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.56e-33,6;CL:0002541,4.17e-30,3;CL:0002097,2.59e-12,2;CL:0000174,1.21e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.49e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!3.38e-17!3;UBERON:0000920!3.38e-17!3;UBERON:0003124!5.93e-13!7;UBERON:0000966!3.59e-10!5;UBERON:0005388!3.59e-10!5;UBERON:0001802!3.59e-10!5;UBERON:0005631!1.34e-09!14;UBERON:0000158!1.34e-09!14;UBERON:0001781!2.57e-08!3;UBERON:0001782!2.57e-08!3;UBERON:0005424!2.57e-08!3;UBERON:0000478!1.39e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.67e-30;3!UBERON:0000920;2.67e-30;3!UBERON:0005631;8.09e-10;10!UBERON:0000158;8.09e-10;10!UBERON:0000478;5.65e-09;24!UBERON:0002369;1.26e-08;3!UBERON:0001235;1.26e-08;3!UBERON:0006858;1.26e-08;3!UBERON:0001987;7.07e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.17e-30,3;UBERON:0003124,6.20e-29,7;UBERON:0005631,7.34e-15,14;UBERON:0000158,7.34e-15,14;UBERON:0000478,6.05e-09,24;UBERON:0002369,1.21e-08,3;UBERON:0001235,1.21e-08,3;UBERON:0006858,1.21e-08,3;UBERON:0001987,6.87e-07,4;UBERON:0004340,6.87e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0.598390972864896,0,0,0,0,0.502497330513487,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.738651018262192,1.63802985597466,1.18904929830983,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.656029291399411,0.650756789328606,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03909399843975,0,0.31900115973192,2.38153742844842,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,1.28664954824955,0,0,0,0,0,1.85280868296583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39496399439125,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@HTRA4 | |||
}} |
Latest revision as of 04:48, 18 September 2015
Short description: | p5@HTRA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HTRA4_5end |
Coexpression cluster: | C4753_choriocarcinoma_chorionic_placenta_mesothelioma_Macrophage_Retinal_CD14 |
Association with transcript: | 34bp_to_ENST00000302495_5end |
EntrezGene: | HTRA4 |
HGNC: | 26909 |
UniProt: | P83105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.56e-33 | 6 |
chorionic membrane mesenchymal stem cell | 4.17e-30 | 3 |
cortical cell of adrenal gland | 2.59e-12 | 2 |
steroid hormone secreting cell | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.17e-30 | 3 |
chorion | 6.20e-29 | 7 |
extraembryonic membrane | 7.34e-15 | 14 |
membranous layer | 7.34e-15 | 14 |
extraembryonic structure | 6.05e-09 | 24 |
adrenal gland | 1.21e-08 | 3 |
adrenal cortex | 1.21e-08 | 3 |
adrenal/interrenal gland | 1.21e-08 | 3 |
placenta | 6.87e-07 | 4 |
allantois | 6.87e-07 | 4 |