FFCP PHASE1:Hg19::chr21:35445827..35445886,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6526,64968 | |EntrezGene=6526,64968 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11038,14051 | |HGNC=11038,14051 | ||
|TSSclassifier=strong | |||
|UniProt=P53794 | |UniProt=P53794 | ||
|association_with_transcript=0bp_to_ENST00000381151,ENST00000477091,NM_006933_5end | |association_with_transcript=0bp_to_ENST00000381151,ENST00000477091,NM_006933_5end | ||
|cluster_id=chr21:35445827..35445886,+ | |||
|coexpression_cluster_id=C356 | |||
|description=CAGE_peak_1_at_MRPS6_5end,CAGE_peak_1_at_SLC5A3_5end | |description=CAGE_peak_1_at_MRPS6_5end,CAGE_peak_1_at_SLC5A3_5end | ||
|id=chr21:35445827..35445886,+ | |id=chr21:35445827..35445886,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.36e-07;24!UBERON:0011143;2.36e-07;24!UBERON:0000489;4.24e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.31e-07,26;UBERON:0003918,3.31e-07,26;UBERON:0011143,3.31e-07,26;UBERON:0005095,3.31e-07,26;UBERON:0007687,3.31e-07,26;UBERON:0000489,5.32e-07,31 | |||
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|short_description=p1@MRPS6,p1@SLC5A3 | |short_description=p1@MRPS6,p1@SLC5A3 | ||
}} | }} |
Latest revision as of 05:31, 18 September 2015
Short description: | p1@MRPS6, p1@SLC5A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPS6_5end, CAGE_peak_1_at_SLC5A3_5end |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | 0bp_to_ENST00000381151, ENST00000477091, NM_006933_5end |
EntrezGene: | 6526,64968 |
HGNC: | 14051&submit=Submit 11038, 14051 |
UniProt: | P53794 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 3.31e-07 | 26 |
kidney mesenchyme | 3.31e-07 | 26 |
upper urinary tract | 3.31e-07 | 26 |
kidney rudiment | 3.31e-07 | 26 |
kidney field | 3.31e-07 | 26 |
cavitated compound organ | 5.32e-07 | 31 |