FFCP PHASE1:Hg19::chr1:45241706..45241728,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:45241706..45241728,+ to FFCP PHASE1:Hg19::chr1:45241706..45241728,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6202 | |EntrezGene=6202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10441 | |HGNC=10441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=398bp_to_ENST00000485390_5end | |||
|cluster_id=chr1:45241706..45241728,+ | |||
|description=CAGE_peak_2_at_RPS8_5end | |||
|id=chr1:45241706..45241728,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.45e-12!42;CL:0000860!4.33e-11!45;CL:0002194!4.16e-07!63;CL:0000576!4.16e-07!63;CL:0000040!4.16e-07!63;CL:0000559!4.16e-07!63;CL:0002009!4.97e-07!65;CL:0002087!8.20e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.59e-13;33!CL:0002057;3.59e-13;33!CL:0000473;4.13e-09;39!CL:0000234;4.13e-09;39!CL:0000576;6.76e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.49e-14,42;CL:0002057,1.49e-14,42;CL:0000473,3.96e-13,48;CL:0000234,3.96e-13,48;CL:0002194,4.67e-09,59;CL:0000576,4.67e-09,59;CL:0000040,4.67e-09,59;CL:0000559,4.67e-09,59;CL:0002009,5.02e-09,61;CL:0000557,2.73e-08,67;CL:0000839,5.37e-08,66;CL:0002087,3.35e-07,115;CL:0002031,3.75e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;4.10e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.01e-07,76;UBERON:0001474,3.62e-07,82 | |||
|phase1_expression=0.908391896352783,2.5692062866918,1.12763523276777,1.0007329835313,1.78784437770915,3.48935409640147,5.06599756336621,1.89515962028049,0.261185628199839,0.245733936501509,1.39560233594486,0.436882744260345,0.527533956456907,1.11389717664042,0.994192127183747,2.6893005858071,4.21886169616784,2.19093027116212,1.46379839637152,0.123121058076788,1.42800483870977,0,0.286235987131057,0.958120975510189,0.502170558379211,0.687720651731561,0.246301768349837,0.629686250509434,0.786728553697808,0.767658796194425,0.928896739896456,0,0.6024118375565,1.10926203050036,0.309868802321207,0.568676929949686,2.93600439334847,0.553995408531877,1.00272223735071,0,0.447830948479849,0,0,1.89017710413434,3.02300754951048,1.21292030593908,2.55671940596253,1.6446715520873,4.33588919253145,1.7261543539329,2.0492856522328,2.83778675866302,2.41321976515633,2.5819387343353,5.41705946377367,1.69418105588344,2.45615535052061,1.79778787556068,2.75475503133812,1.60464513538047,1.91801137739712,1.31940520074686,2.39356389145958,2.13112375266347,0.870627715885752,2.26954089876456,3.73693349397345,0.75374599577023,3.65038042894141,4.12658804939722,1.81619850790011,2.20966581592539,4.74693581161327,3.16882929467913,2.12604299965044,1.04829322754188,0.786300418025466,1.80212271409808,0,0.570025487482497,2.58591680358817,0.91332076882317,0,2.73069305631066,0,0.853460445133014,3.2031678962881,0.574752439954483,0,0,2.27685187643779,2.93618594685469,0.764546456250458,0,1.68152568894461,1.31692042387539,0.590129310341499,2.75107533924415,0.822405995998037,1.67186495390678,7.17028986593899,8.5220605032252,3.89653456815823,2.1167986808183,2.94605907474837,2.87994062958707,1.89562704635511,1.5370958367081,0.520237390239513,1.47994114143309,2.76350017785848,1.15921234294021,3.55887751588945,1.33770414044857,3.1360657141493,1.13309342697566,8.81407135284419,4.46715679127419,4.04831507231205,1.91139248594458,2.60433381542567,0.950452044448374,0.903450714466637,0.76791966692651,1.24930726552346,0.710331756132051,0,0.604820229674197,1.33720097891754,1.01377082717959,0,0.670700859703636,0.383587685530591,1.0843174571537,1.00267582127178,1.01392563272577,0,0,0.945348171640679,1.33037638477538,0.351339142772504,0.327447688744282,0.364295288292542,0,0.324547393654683,0.522389211897802,0.664789802594326,0.238490624305342,0.571994910780128,0,0.198762407366705,1.72046919021225,0.347140501607594,0,1.67799774483962,1.10047216776027,0.626984899610432,1.03366703667732,0.71153252537342,0.33472061276467,0.402829317109147,0.760272105718513,0.488124115096339,0.735326160691737,2.43042584364528,0.357198913136319,0.22452937262617,0.112611480483322,0,0.949265659568129,0.366403487860815,0,0,0.436094052142534,0.496971951695318,0.759783069987479,0,0.860509862246441,1.41867352879343,4.48542080113846,1.06748995729705,0.98667019366864,0,1.48181739276657,1.79808093424805,0.605429710579726,0.576175924479999,0,0.624320153660641,0.570471821544449,0.896692083310806,0.822041490506354,0.971237666208789,1.12360645361799,0.204154171254893,1.59684612505298,0.723280468230358,0,2.22540236350701,0,0,1.0100166837244,0.500474079487857,0,0.877955241761676,2.45190236639216,0.45071417671979,1.36118619792025,0,1.06778694409284,0.423863802319124,0.300091096084402,1.13357782162283,0,0.930584281657949,0.337552664482532,0.779496041289589,0,0.368199594569197,1.77810662500693,0,0.806016785821122,0.847802961552438,0,0.272746120590835,0,0.975789649036763,1.06023814657188,0.813357600086629,0.414644220061482,1.51392510525377,1.09493207722749,0,0.643240938192885,0,1.85747171212792,0.721879481669586,1.41968160047813,1.01150814046861,0.241011029883482,1.43382164552112,1.30727666455444,0.474541238222193,1.48314438976181,1.17732879075208,1.92373578473195,0,0,0,0,0,0,0,0.882926198829301,0.245976877086227,0.514703430895577,0.439001141634502,3.37205259772859,0.502644862058154,1.01847289674383,0.325808305310325,1.03993478527958,1.44331342025273,0.34779121492523,0.117408694235822,0.433099343283221,0,1.52203321787679,0.790204397959275,1.71697232418975,0,0.234004265139238,0.594524649154913,0,0.335964256397719,0.992425680696705,0.179117045405697,0.871901815541886,0,0,0.264145302039678,1.4512968087854,0.864719720501769,1.38866676769018,0,0,0,0,0.514137463516618,0.600686115687835,1.42913216315289,0.224262168690721,0,0.5867062865676,0.517086863031111,0,0.845302752556,0.797814349754612,2.08014873822732,0.514414748524284,2.83698264046557,0.532844358032199,0.142977993658148,0.542621605391443,2.46972101034231,0.325736184293735,1.06617584622764,0,0.301439377059586,0,0.299918973546171,1.2162378064119,0.502257091432126,4.21667878966063,0.718874566474748,2.29723871668228,0,0.434343920002738,1.64381058040307,0,0.112085143993527,0.197030760201927,1.50939302401662,0.385029108839245,0.76228387266739,0,0,0,7.65526501983796,0,0,0,0.858840442033979,1.00034104211935,1.35632511849868,0.831883446123229,2.14114786556594,1.41932173530541,0.819989904948992,1.20378439891088,2.27407504055985,2.0694614258501,0,0.921845842708516,0.69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| ||
|short_description=p2@RPS8 | |||
}} | }} |
Latest revision as of 06:46, 18 September 2015
Short description: | p2@RPS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPS8_5end |
Coexpression cluster: | NA |
Association with transcript: | 398bp_to_ENST00000485390_5end |
EntrezGene: | RPS8 |
HGNC: | 10441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.49e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.49e-14 | 42 |
defensive cell | 3.96e-13 | 48 |
phagocyte | 3.96e-13 | 48 |
monopoietic cell | 4.67e-09 | 59 |
monocyte | 4.67e-09 | 59 |
monoblast | 4.67e-09 | 59 |
promonocyte | 4.67e-09 | 59 |
macrophage dendritic cell progenitor | 5.02e-09 | 61 |
granulocyte monocyte progenitor cell | 2.73e-08 | 67 |
myeloid lineage restricted progenitor cell | 5.37e-08 | 66 |
nongranular leukocyte | 3.35e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 3.75e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.01e-07 | 76 |
bone element | 3.62e-07 | 82 |