FFCP PHASE1:Hg19::chr5:58334901..58334921,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt=Q08499 | |UniProt=Q08499 | ||
|association_with_transcript=417bp_to_ENST00000358923,NM_001197221,uc003jrt.2_5end | |association_with_transcript=417bp_to_ENST00000358923,NM_001197221,uc003jrt.2_5end | ||
|cluster_id=chr5:58334901..58334921,- | |||
|coexpression_cluster_id=C1762 | |coexpression_cluster_id=C1762 | ||
|description=CAGE_peak_32_at_PDE4D_5end | |description=CAGE_peak_32_at_PDE4D_5end | ||
|id=chr5:58334901..58334921,- | |id=chr5:58334901..58334921,- | ||
|ontology_enrichment_celltype=CL:0000623;1.77e-16;3!CL:0000767;1.55e-15;3!CL:0000226;2.42e-15;3!CL:0000842;2.42e-15;3!CL:0000094;3.07e-10;8!CL:0002393;1.07e-07;6!CL:0002397;1.07e-07;6!CL:0000081;1.84e-07;11 | |ontology_enrichment_celltype=CL:0000084!1.26e-08!25;CL:0000827!1.26e-08!25;CL:0000791!2.12e-08!18;CL:0000789!2.12e-08!18;CL:0002420!2.12e-08!18;CL:0002419!2.12e-08!18;CL:0000790!2.12e-08!18 | ||
| | |ontology_enrichment_celltype_v019=CL:0000623;1.77e-16;3!CL:0000767;1.55e-15;3!CL:0000226;2.42e-15;3!CL:0000842;2.42e-15;3!CL:0000094;3.07e-10;8!CL:0002393;1.07e-07;6!CL:0002397;1.07e-07;6!CL:0000081;1.84e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.69e-16,3;CL:0000825,1.69e-16,3;CL:0000767,1.28e-15,3;CL:0000226,2.31e-15,3;CL:0000842,2.31e-15,3;CL:0000094,2.66e-10,8;CL:0000738,9.54e-08,136;CL:0000081,1.66e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002133;1.05e-11;2!UBERON:0001905;8.21e-11;2!UBERON:0002757;8.21e-11;2!UBERON:0010134;8.21e-11;2!UBERON:0005408;8.21e-11;2!UBERON:0001899;8.21e-11;2!UBERON:0003978;4.51e-08;3!UBERON:0000946;4.51e-08;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;1.05e-11;2!UBERON:0001905;8.21e-11;2!UBERON:0002757;8.21e-11;2!UBERON:0010134;8.21e-11;2!UBERON:0005408;8.21e-11;2!UBERON:0001899;8.21e-11;2!UBERON:0003978;4.51e-08;3!UBERON:0000946;4.51e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,1.03e-11,2;UBERON:0001905,1.42e-10,2;UBERON:0002757,1.42e-10,2;UBERON:0010134,1.42e-10,2;UBERON:0005408,1.42e-10,2;UBERON:0001899,1.42e-10,2;UBERON:0003978,4.44e-08,3;UBERON:0009751,4.44e-08,3;UBERON:0000946,4.44e-08,3;UBERON:0002523,4.44e-08,3;UBERON:0005983,4.44e-08,3;UBERON:0002165,4.44e-08,3;UBERON:0002062,4.44e-08,3;UBERON:0007280,4.44e-08,3 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.522371256399677,0,0,0.218441372130172,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,1.57345710739562,13.0501995353052,1.54816123316076,0,0,0,0,0.142169232487422,0,1.66198622559563,1.20326668482085,1.73608696572681,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0.75374599577023,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80254281490768,0,0.983548850569165,1.17903228824749,1.64481199199607,0.167186495390678,0,0,0,0.779873198196215,0.294605907474837,0.664601683750863,0.541607727530031,0,0.260118695119756,0.493313713811028,0.829050053357545,1.15921234294021,0.14828656316206,0,1.04535523804977,0.339928028092699,0.766440987203842,1.03088233644789,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0.821127996921047,5.04016858061831,1.60464117470104,2.46201486600758,0,0,0,0,0,0.579386075843295,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0.269421344139376,0,0,0,0.468642863667593,0,0,0,0.23486899728753,0,0,0.408308342509787,0,0.309977343527296,3.56400857184616,1.23633464639278,0,0,0,0,0,0,0,0.600952235626387,0.113432183160021,0.538168907066586,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0.845302752556,0,0,0,0,0,0.57191197463259,1.62786481617433,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.224170287987055,6.69904584686553,4.09692392233083,3.85029108839245,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0.36807447515742,0,0.813795071099207,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,1.86091223510599,1.07857100409308,3.09509917629989,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0.096670718292122,0,0.614014698904518,0,0.751941714077915,0.870100163485371,0.0852266274161009,0.178064071293475,0,0,0,0,0,0.62962469366128,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0.855877976067841,0.318203247925937,0,0.179872457583315,0.823611089208164,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,1.31178950409327,0,0.30982349809975,0,0.143411352204052,0,0,0,0.422215270595328,0.329294892959902,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.293016358543788,0.728163130497081,0,0,0.47748896947538,0.296964680832639,0,0,0,0.111308705022906,0.329607748453519,3.1668811219199,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.227884111694002,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0.865554558968364,0,0,0.611030144933625,0.593042257361244,0.123563938946503,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0,0.189559738885464,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0,0,0,0,2.15106521008283,0,0.213452994739353,0,0,3.89424426964113,0,0.14405479798815,0.124252535565433,1.17847017308398,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,5.58564802544508,0.458320848023367,7.17873024576814,0.199679000498991,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0.77380195455795,0,0,0.236417121897595,0,0.211200673038813,0,0,0,0.662091970365432,2.5426853765475,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,1.71086837884329,0,0.427149650270779,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0.756154618816195,0.466311601748341,0.295710299979268,0,0.449803112163605,0.155262956876259,0,0.265841714557995,0,0.601030435988874,0.380805212168795,0,0,0.214821114084977,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999936979274649,0,0.861074898304078,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,1.07140367175657,2.01770233331294,0,0.682986574053893,0.0887023701626388,0.115233987555779,0,0,0,0.118193840883968,0,0.078493092850514,0,0.280272163313789,0,0,0,0.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| ||
|short_description=p32@PDE4D | |short_description=p32@PDE4D | ||
}} | }} |
Latest revision as of 07:01, 18 September 2015
Short description: | p32@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_PDE4D_5end |
Coexpression cluster: | C1762_Basophils_Natural_CD8_heart_Peripheral_CD4_CD14 |
Association with transcript: | 417bp_to_ENST00000358923, NM_001197221, uc003jrt.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | Q08499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.69e-16 | 3 |
pro-NK cell | 1.69e-16 | 3 |
basophil | 1.28e-15 | 3 |
single nucleate cell | 2.31e-15 | 3 |
mononuclear cell | 2.31e-15 | 3 |
granulocyte | 2.66e-10 | 8 |
leukocyte | 9.54e-08 | 136 |
blood cell | 1.66e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 1.03e-11 | 2 |
pineal body | 1.42e-10 | 2 |
regional part of epithalamus | 1.42e-10 | 2 |
secretory circumventricular organ | 1.42e-10 | 2 |
circumventricular organ | 1.42e-10 | 2 |
epithalamus | 1.42e-10 | 2 |
valve | 4.44e-08 | 3 |
cardiac mesenchyme | 4.44e-08 | 3 |
cardial valve | 4.44e-08 | 3 |
tunica intima | 4.44e-08 | 3 |
heart layer | 4.44e-08 | 3 |
endocardium | 4.44e-08 | 3 |
endocardial cushion | 4.44e-08 | 3 |
presumptive endocardium | 4.44e-08 | 3 |