FFCP PHASE1:Hg19::chr5:58334901..58334921,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:58334901..58334921,-
|short_description=p32@PDE4D
|description=CAGE_peak_32_at_PDE4D_5end
|association_with_transcript=417bp_to_ENST00000358923,NM_00119722...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt=Q08499 | |UniProt=Q08499 | ||
|association_with_transcript=417bp_to_ENST00000358923,NM_001197221,uc003jrt.2_5end | |||
|cluster_id=chr5:58334901..58334921,- | |||
|coexpression_cluster_id=C1762 | |||
|description=CAGE_peak_32_at_PDE4D_5end | |||
|id=chr5:58334901..58334921,- | |||
|ontology_enrichment_celltype=CL:0000084!1.26e-08!25;CL:0000827!1.26e-08!25;CL:0000791!2.12e-08!18;CL:0000789!2.12e-08!18;CL:0002420!2.12e-08!18;CL:0002419!2.12e-08!18;CL:0000790!2.12e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.77e-16;3!CL:0000767;1.55e-15;3!CL:0000226;2.42e-15;3!CL:0000842;2.42e-15;3!CL:0000094;3.07e-10;8!CL:0002393;1.07e-07;6!CL:0002397;1.07e-07;6!CL:0000081;1.84e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.69e-16,3;CL:0000825,1.69e-16,3;CL:0000767,1.28e-15,3;CL:0000226,2.31e-15,3;CL:0000842,2.31e-15,3;CL:0000094,2.66e-10,8;CL:0000738,9.54e-08,136;CL:0000081,1.66e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;1.05e-11;2!UBERON:0001905;8.21e-11;2!UBERON:0002757;8.21e-11;2!UBERON:0010134;8.21e-11;2!UBERON:0005408;8.21e-11;2!UBERON:0001899;8.21e-11;2!UBERON:0003978;4.51e-08;3!UBERON:0000946;4.51e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,1.03e-11,2;UBERON:0001905,1.42e-10,2;UBERON:0002757,1.42e-10,2;UBERON:0010134,1.42e-10,2;UBERON:0005408,1.42e-10,2;UBERON:0001899,1.42e-10,2;UBERON:0003978,4.44e-08,3;UBERON:0009751,4.44e-08,3;UBERON:0000946,4.44e-08,3;UBERON:0002523,4.44e-08,3;UBERON:0005983,4.44e-08,3;UBERON:0002165,4.44e-08,3;UBERON:0002062,4.44e-08,3;UBERON:0007280,4.44e-08,3 | |||
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| ||
|short_description=p32@PDE4D | |||
}} | }} |
Latest revision as of 07:01, 18 September 2015
Short description: | p32@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_PDE4D_5end |
Coexpression cluster: | C1762_Basophils_Natural_CD8_heart_Peripheral_CD4_CD14 |
Association with transcript: | 417bp_to_ENST00000358923, NM_001197221, uc003jrt.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | Q08499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.69e-16 | 3 |
pro-NK cell | 1.69e-16 | 3 |
basophil | 1.28e-15 | 3 |
single nucleate cell | 2.31e-15 | 3 |
mononuclear cell | 2.31e-15 | 3 |
granulocyte | 2.66e-10 | 8 |
leukocyte | 9.54e-08 | 136 |
blood cell | 1.66e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 1.03e-11 | 2 |
pineal body | 1.42e-10 | 2 |
regional part of epithalamus | 1.42e-10 | 2 |
secretory circumventricular organ | 1.42e-10 | 2 |
circumventricular organ | 1.42e-10 | 2 |
epithalamus | 1.42e-10 | 2 |
valve | 4.44e-08 | 3 |
cardiac mesenchyme | 4.44e-08 | 3 |
cardial valve | 4.44e-08 | 3 |
tunica intima | 4.44e-08 | 3 |
heart layer | 4.44e-08 | 3 |
endocardium | 4.44e-08 | 3 |
endocardial cushion | 4.44e-08 | 3 |
presumptive endocardium | 4.44e-08 | 3 |