FFCP PHASE1:Hg19::chr4:68829226..68829237,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339967 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27954 | |||
|TSSclassifier=strong | |||
|UniProt=B5MDI9,A8KA85,Q6ZMR5 | |||
|association_with_transcript=0bp_to_ENST00000396188,NM_001114387,NM_182606,uc003hdr.1,uc003hds.1_5end | |||
|cluster_id=chr4:68829226..68829237,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_3_at_TMPRSS11A_5end | |||
|id=chr4:68829226..68829237,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.05e-34;1!UBERON:0008814;5.48e-18;2!UBERON:0010056;5.48e-18;2 | |||
|ontology_enrichment_disease=DOID:4074!6.94e-09!2;DOID:4905!6.94e-09!2;DOID:3498!6.94e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!2.18e-31!2;UBERON:0006562!9.09e-23!11;UBERON:0001723!8.53e-22!3;UBERON:0001033!8.53e-22!3;UBERON:0010056!8.53e-22!3;UBERON:0002372!8.86e-17!1;UBERON:0001961!8.86e-17!1;UBERON:0001744!8.86e-17!1;UBERON:0001735!8.86e-17!1;UBERON:0000997!3.07e-16!1;UBERON:0005056!3.07e-16!1;UBERON:0001042!1.22e-14!10;UBERON:0009145!1.22e-14!10;UBERON:0003126!1.09e-09!7;UBERON:0001005!1.09e-09!7;UBERON:0000341!4.34e-09!2;UBERON:0001255!8.09e-09!2;UBERON:0001556!8.09e-09!2;UBERON:0004921!9.55e-09!129;UBERON:0004185!9.55e-09!129;UBERON:0000072!2.07e-08!46;UBERON:0000078!2.16e-08!18;UBERON:0001557!5.61e-08!19;UBERON:0000161!2.46e-07!35;UBERON:0000065!2.72e-07!53;UBERON:0000166!2.88e-07!21;UBERON:0001041!3.04e-07!98;UBERON:0001007!3.88e-07!155;UBERON:0001555!3.88e-07!155;UBERON:0007026!3.88e-07!155;UBERON:0000077!6.72e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;5.59e-45;3!UBERON:0001033;5.59e-45;3!UBERON:0002372;8.34e-34;1!UBERON:0001961;8.34e-34;1!UBERON:0001744;8.34e-34;1!UBERON:0001042;8.34e-34;1!UBERON:0001735;8.34e-34;1!UBERON:0000341;9.07e-18;2!UBERON:0006562;1.17e-17;2!UBERON:0001043;2.19e-12;3!UBERON:0000165;2.13e-11;28!UBERON:0000974;8.48e-07;6!UBERON:0000020;8.99e-07;23!UBERON:0000002;9.23e-07;6!UBERON:0001560;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,6.25e-45,3;UBERON:0001033,6.25e-45,3;UBERON:0010056,6.25e-45,3;UBERON:0002372,7.06e-34,1;UBERON:0001961,7.06e-34,1;UBERON:0001744,7.06e-34,1;UBERON:0001735,7.06e-34,1;UBERON:0001042,2.27e-30,10;UBERON:0009145,2.27e-30,10;UBERON:0006562,1.07e-27,11;UBERON:0000341,9.07e-18,2;UBERON:0001557,2.05e-16,19;UBERON:0000166,2.73e-14,22;UBERON:0001043,2.07e-12,3;UBERON:0009143,2.07e-12,3;UBERON:0000165,4.97e-11,29;UBERON:0000930,4.97e-11,29;UBERON:0000153,4.24e-09,62;UBERON:0007811,4.24e-09,62;UBERON:0000161,5.00e-09,36;UBERON:0008814,2.17e-08,18;UBERON:0007023,1.12e-07,114;UBERON:0000072,4.50e-07,47;UBERON:0001444,8.23e-07,49;UBERON:0000002,9.49e-07,6;UBERON:0001560,9.49e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07765697960252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,5.62536295632833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.4779136199206,0,0,0,0,0,0,6.09606894111492,5.4757328173645,2.55937801455433,0.502055437748735,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@TMPRSS11A | |||
}} |
Latest revision as of 07:20, 18 September 2015
Short description: | p3@TMPRSS11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMPRSS11A_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000396188, NM_001114387, NM_182606, uc003hdr.1, uc003hds.1_5end |
EntrezGene: | TMPRSS11A |
HGNC: | 27954 |
UniProt: | B5MDI9A8KA85Q6ZMR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 6.25e-45 | 3 |
gustatory system | 6.25e-45 | 3 |
future tongue | 6.25e-45 | 3 |
tonsil | 7.06e-34 | 1 |
mucosa-associated lymphoid tissue | 7.06e-34 | 1 |
lymphoid tissue | 7.06e-34 | 1 |
tonsillar ring | 7.06e-34 | 1 |
chordate pharynx | 2.27e-30 | 10 |
pharyngeal region of foregut | 2.27e-30 | 10 |
pharynx | 1.07e-27 | 11 |
throat | 9.07e-18 | 2 |
upper respiratory tract | 2.05e-16 | 19 |
oral opening | 2.73e-14 | 22 |
esophagus | 2.07e-12 | 3 |
esophageal region | 2.07e-12 | 3 |
mouth | 4.97e-11 | 29 |
stomodeum | 4.97e-11 | 29 |
anterior region of body | 4.24e-09 | 62 |
craniocervical region | 4.24e-09 | 62 |
orifice | 5.00e-09 | 36 |
pharyngeal arch system | 2.17e-08 | 18 |
adult organism | 1.12e-07 | 114 |
segment of respiratory tract | 4.50e-07 | 47 |
subdivision of head | 8.23e-07 | 49 |
uterine cervix | 9.49e-07 | 6 |
neck of organ | 9.49e-07 | 6 |