FFCP PHASE1:Hg19::chr1:46751496..46751511,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10489 | |EntrezGene=10489 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16917 | |HGNC=16917 | ||
|TSSclassifier=strong | |||
|UniProt=Q15345 | |UniProt=Q15345 | ||
|association_with_transcript=272bp_to_X86018_5end | |association_with_transcript=272bp_to_X86018_5end | ||
|cluster_id=chr1:46751496..46751511,- | |||
|description=CAGE_peak_7_at_LRRC41_5end | |description=CAGE_peak_7_at_LRRC41_5end | ||
|id=chr1:46751496..46751511,- | |id=chr1:46751496..46751511,- | ||
|ontology_enrichment_celltype=CL:0000346;1.88e-16;3!CL:1000428;1.88e-16;3!CL:0000511;1.61e-13;1!CL:0002625;1.61e-13;1!CL:0000216;1.61e-13;1!CL:0002581;2.18e-13;1!CL:0002559;2.97e-10;5!CL:0002363;4.04e-07;2 | |ontology_enrichment_celltype=CL:0000055!7.02e-07!180 | ||
| | |ontology_enrichment_celltype_v019=CL:0000346;1.88e-16;3!CL:1000428;1.88e-16;3!CL:0000511;1.61e-13;1!CL:0002625;1.61e-13;1!CL:0000216;1.61e-13;1!CL:0002581;2.18e-13;1!CL:0002559;2.97e-10;5!CL:0002363;4.04e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.27e-16,3;CL:1000428,1.27e-16,3;CL:0000511,1.61e-13,1;CL:0002625,1.61e-13,1;CL:0000216,1.61e-13,1;CL:0002581,1.82e-13,1;CL:0002559,2.35e-10,5;CL:0002363,5.28e-07,2;CL:0000008,5.28e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;4.04e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000412;1.88e-16;3!UBERON:0001992;1.88e-16;3!UBERON:0001136;1.61e-13;1!UBERON:0001343;1.61e-13;1!UBERON:0004910;1.61e-13;1!UBERON:0004813;1.61e-13;1!UBERON:0002073;2.97e-10;5!UBERON:0001003;1.26e-07;15!UBERON:0007376;1.26e-07;15!UBERON:0004909;2.15e-07;2!UBERON:0005406;2.50e-07;2!UBERON:0003566;4.04e-07;2!UBERON:0001777;4.04e-07;2!UBERON:0000473;5.79e-07;8 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.88e-16;3!UBERON:0001992;1.88e-16;3!UBERON:0001136;1.61e-13;1!UBERON:0001343;1.61e-13;1!UBERON:0004910;1.61e-13;1!UBERON:0004813;1.61e-13;1!UBERON:0002073;2.97e-10;5!UBERON:0001003;1.26e-07;15!UBERON:0007376;1.26e-07;15!UBERON:0004909;2.15e-07;2!UBERON:0005406;2.50e-07;2!UBERON:0003566;4.04e-07;2!UBERON:0001777;4.04e-07;2!UBERON:0000473;5.79e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.27e-16,3;UBERON:0001992,1.27e-16,3;UBERON:0001136,1.61e-13,1;UBERON:0001343,1.61e-13,1;UBERON:0004910,1.61e-13,1;UBERON:0005154,1.61e-13,1;UBERON:0005295,1.61e-13,1;UBERON:0004813,1.61e-13,1;UBERON:0005297,1.61e-13,1;UBERON:0005294,1.61e-13,1;UBERON:0010141,1.61e-13,1;UBERON:0005891,1.61e-13,1;UBERON:0002073,2.35e-10,5;UBERON:0005086,2.35e-10,5;UBERON:0001003,1.14e-07,15;UBERON:0007376,1.14e-07,15;UBERON:0007383,1.14e-07,15;UBERON:0004909,2.15e-07,2;UBERON:0005406,2.28e-07,2;UBERON:0003566,5.28e-07,2;UBERON:0001777,5.28e-07,2;UBERON:0000473,6.06e-07,8 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,1.22400414746552,0.313454721478088,0,0.136874425072884,0.376627918784408,0.229240217243854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.392937226493138,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0,0,0,0,0.402829317109147,0,0.488124115096339,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0.132409180813219,0.573673241497627,0,0,0,0.74000264525148,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0.597794722207204,0.117434498643765,0,0,0.204154171254893,0,0,1.18800285728205,0.989067717114227,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0.340296549480063,0,0,0.423863802319124,0.300091096084402,0.309157587715317,0,0.18611685633159,0,0.194874010322397,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0.193260853163297,0,0,0,0,0.232387885739037,0.207322110030741,0,0,0,1.28648187638577,1.38134921352481,0.464367928031979,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.219500570817251,2.24803506515239,0.603173834469785,0.0925884451585296,0,1.03993478527958,0,0.115930404975077,0,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.447792613514241,0,0.383382679165211,0,0,0,0.288239906833923,0.37872730027914,0.063497894292169,0.763976851116555,1.17217447210047,0,0.411309970813294,0.300343057843917,0.285826432630578,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,0,0,0.532844358032199,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0.61642896765115,0,0,0,0,0.128343036279748,0,0,0,0.502548796003046,0,0,0,0,0.49076596687656,0,0.271265023699736,0.415941723061614,0.356857977594324,0.157702415033935,0,0.300946099727719,2.27407504055985,1.03473071292505,0,0.737476674166813,0.434418072340414,0.587403472388222,0,0,0,0.106727557803444,0.606255142892519,0,0.907170879989041,0.496215615637554,0.153461973288062,0.280660094433074,0,0,0.321707842287215,2.96836132889982,0.154209693802656,0,0.164254312027618,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0.229628896329213,0.364182336013434,0.786746489756545,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0,0,0,0.223874754722178,0.219259876645935,0,0,0.656029291399411,0.976135183992909,0.206082023295445,0.0915694648183434,0.082509499920588,0.574265537996172,0,3.21367859688319,0.773365746336976,0.308097234229289,0.15350367472613,0.275673144969061,0.429680979473094,0.580066775656914,0.0852266274161009,0.267096106940212,0.330569830721956,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0,0,0.511795582622668,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0.409499734223957,0.282810863907425,0,0,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0,0.286822704408103,0,0,0,0.422215270595328,0.987884678879706,0,0,0.192444225451024,0,0,0.564862804660675,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0.0711418433484141,0,0.399158742865633,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0.111443384277478,0,0,0.890894042497916,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.185536196323703,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,0,0.482385754501632,0,0,0,0.219385397153973,0,0,0.230850775511391,0,0,0.269272933229316,0,0,0.641183153813036,0,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0.163232808159148,0,0.432777279484182,0,0.353830258013357,0,0.296521128680622,0.123563938946503,0,0,0,0.468528891450678,0,0,0,0,1.20990716048664,0,0.442306057399416,0.901940516486955,0.622129148383483,0,0,0,0,0,0.416024019039416,0,0.0979923974143777,0.0870592065804026,0.698906672968121,0.171986032471617,0,0,0.0821154570532092,0.484945082442097,0,0,0,0,0,0,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0.343189995723929,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0.199679000498991,0.429226048136571,0.446342914883745,0.0671834724867263,0,0,0,0.24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| ||
|short_description=p7@LRRC41 | |short_description=p7@LRRC41 | ||
}} | }} |
Latest revision as of 08:47, 18 September 2015
Short description: | p7@LRRC41 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LRRC41_5end |
Coexpression cluster: | NA |
Association with transcript: | 272bp_to_X86018_5end |
EntrezGene: | LRRC41 |
HGNC: | 16917 |
UniProt: | Q15345 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.27e-16 | 3 |
stem cell of epidermis | 1.27e-16 | 3 |
androgen binding protein secreting cell | 1.61e-13 | 1 |
seminiferous tubule epithelial cell | 1.61e-13 | 1 |
Sertoli cell | 1.61e-13 | 1 |
perirenal preadipocyte | 1.82e-13 | 1 |
hair follicle cell | 2.35e-10 | 5 |
keratocyte | 5.28e-07 | 2 |
migratory cranial neural crest cell | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.27e-16 | 3 |
papillary layer of dermis | 1.27e-16 | 3 |
mesothelium | 1.61e-13 | 1 |
seminiferous tubule of testis | 1.61e-13 | 1 |
epithelium of male gonad | 1.61e-13 | 1 |
epithelial cord | 1.61e-13 | 1 |
sex cord | 1.61e-13 | 1 |
seminiferous tubule epithelium | 1.61e-13 | 1 |
testis sex cord | 1.61e-13 | 1 |
genital ridge | 1.61e-13 | 1 |
primitive sex cord of indifferent gonad | 1.61e-13 | 1 |
coelomic epithelium | 1.61e-13 | 1 |
hair follicle | 2.35e-10 | 5 |
hair follicle placode | 2.35e-10 | 5 |
skin epidermis | 1.14e-07 | 15 |
outer epithelium | 1.14e-07 | 15 |
enveloping layer of ectoderm | 1.14e-07 | 15 |
epithelium of gonad | 2.15e-07 | 2 |
perirenal fat | 2.28e-07 | 2 |
head connective tissue | 5.28e-07 | 2 |
substantia propria of cornea | 5.28e-07 | 2 |
testis | 6.06e-07 | 8 |