FFCP PHASE1:Hg19::chr2:73302288..73302299,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26056 | |EntrezGene=26056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24845 | |HGNC=24845 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_AK024727_5end | |association_with_transcript=3bp_to_AK024727_5end | ||
|cluster_id=chr2:73302288..73302299,- | |||
|description=CAGE_peak_13_at_RAB11FIP5_5end | |description=CAGE_peak_13_at_RAB11FIP5_5end | ||
|id=chr2:73302288..73302299,- | |id=chr2:73302288..73302299,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;3.99e-50;1!CL:0002577;9.45e-18;3 | |ontology_enrichment_celltype_v019=CL:0002591;3.99e-50;1!CL:0002577;9.45e-18;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,3.99e-50,1;CL:0002577,8.00e-18,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.65e-08!59;UBERON:0000990!1.65e-08!59;UBERON:0003101!4.54e-07!22;UBERON:0000079!4.54e-07!22;UBERON:0003937!8.42e-07!12;UBERON:0005399!8.42e-07!12 | |ontology_enrichment_uberon=UBERON:0005156!1.65e-08!59;UBERON:0000990!1.65e-08!59;UBERON:0003101!4.54e-07!22;UBERON:0000079!4.54e-07!22;UBERON:0003937!8.42e-07!12;UBERON:0005399!8.42e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.99e-50;1!UBERON:0000078;7.14e-26;2!UBERON:0002012;7.14e-26;2!UBERON:0008886;7.14e-26;2!UBERON:0001987;1.13e-13;4!UBERON:0000077;2.22e-08;27!UBERON:0000473;1.49e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0007195;3.99e-50;1!UBERON:0000078;7.14e-26;2!UBERON:0002012;7.14e-26;2!UBERON:0008886;7.14e-26;2!UBERON:0001987;1.13e-13;4!UBERON:0000077;2.22e-08;27!UBERON:0000473;1.49e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,6.58e-50,1;UBERON:0000078,7.14e-26,2;UBERON:0007497,7.14e-26,2;UBERON:0003643,7.14e-26,2;UBERON:0003504,7.14e-26,2;UBERON:0003469,7.14e-26,2;UBERON:0003496,7.14e-26,2;UBERON:0002012,7.14e-26,2;UBERON:0008886,7.14e-26,2;UBERON:0007303,7.14e-26,2;UBERON:0002061,7.14e-26,2;UBERON:0005432,7.14e-26,2;UBERON:0004363,7.14e-26,2;UBERON:0004145,9.46e-18,3;UBERON:0001987,1.00e-13,4;UBERON:0004340,1.00e-13,4;UBERON:0003498,3.26e-11,5;UBERON:0005985,3.26e-11,5;UBERON:0010188,1.44e-09,6;UBERON:0002539,1.44e-09,6;UBERON:0003351,1.44e-09,6;UBERON:0008816,1.44e-09,6;UBERON:0003124,2.03e-08,7;UBERON:0000077,6.91e-08,29;UBERON:0000473,1.49e-07,8;UBERON:0000485,8.37e-07,9 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0,0.117141414992713,0.300946099727719,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0.106727557803444,0.303127571446259,1.66435439510497,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.120859449591622,0.601519410909855,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0,0,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0.219267951258557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829412415681711,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,2.65225443763838,0.535928260312357,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0.949265659568129,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0.194874010322397,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0,0.117141414992713,0.300946099727719,0,0,0,0,0.260650843404249,0,0.343143423810856,0,0,0.106727557803444,0.303127571446259,1.66435439510497,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.120859449591622,0.601519410909855,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0,0,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0.219267951258557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829412415681711,0,0,0.150257608997218,0,0,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,2.65225443763838,0.535928260312357,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@RAB11FIP5 | |short_description=p13@RAB11FIP5 | ||
}} | }} |
Latest revision as of 09:03, 18 September 2015
Short description: | p13@RAB11FIP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RAB11FIP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_AK024727_5end |
EntrezGene: | RAB11FIP5 |
HGNC: | 24845 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 3.99e-50 | 1 |
placental epithelial cell | 8.00e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 6.58e-50 | 1 |
mixed ectoderm/mesoderm/endoderm-derived structure | 7.14e-26 | 2 |
developing epithelial placode | 7.14e-26 | 2 |
respiratory system arterial blood vessel | 7.14e-26 | 2 |
respiratory system blood vessel | 7.14e-26 | 2 |
respiratory system artery | 7.14e-26 | 2 |
head blood vessel | 7.14e-26 | 2 |
pulmonary artery | 7.14e-26 | 2 |
pulmonary vascular system | 7.14e-26 | 2 |
pharyngeal vasculature | 7.14e-26 | 2 |
truncus arteriosus | 7.14e-26 | 2 |
aortic sac | 7.14e-26 | 2 |
pharyngeal arch artery | 7.14e-26 | 2 |
outflow tract | 9.46e-18 | 3 |
placenta | 1.00e-13 | 4 |
allantois | 1.00e-13 | 4 |
heart blood vessel | 3.26e-11 | 5 |
coronary vessel | 3.26e-11 | 5 |
protuberance | 1.44e-09 | 6 |
pharyngeal arch | 1.44e-09 | 6 |
pharyngeal epithelium | 1.44e-09 | 6 |
embryonic head | 1.44e-09 | 6 |
chorion | 2.03e-08 | 7 |
mixed endoderm/mesoderm-derived structure | 6.91e-08 | 29 |
testis | 1.49e-07 | 8 |
simple columnar epithelium | 8.37e-07 | 9 |