FFCP PHASE1:Hg19::chr15:59904033..59904043,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9245 | |EntrezGene=9245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |HGNC=4205 | ||
|TSSclassifier=strong | |||
|UniProt=O95395 | |UniProt=O95395 | ||
|association_with_transcript=50bp_to_ENST00000396065,ENST00000560585_5end | |association_with_transcript=50bp_to_ENST00000396065,ENST00000560585_5end | ||
|cluster_id=chr15:59904033..59904043,+ | |||
|coexpression_cluster_id=C1211 | |||
|description=CAGE_peak_14_at_GCNT3_5end | |description=CAGE_peak_14_at_GCNT3_5end | ||
|id=chr15:59904033..59904043,+ | |id=chr15:59904033..59904043,+ | ||
|ontology_enrichment_celltype=CL:0000499!7.86e-09!27;CL:1000497!9.51e-08!18;CL:0002518!9.51e-08!18;CL:0000066!1.06e-07!254;CL:0002150!4.95e-07!3;CL:0000861!4.95e-07!3 | |ontology_enrichment_celltype=CL:0000499!7.86e-09!27;CL:1000497!9.51e-08!18;CL:0002518!9.51e-08!18;CL:0000066!1.06e-07!254;CL:0002150!4.95e-07!3;CL:0000861!4.95e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1000497;3.50e-10;17!CL:0002518;3.50e-10;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.55e-10,17;CL:0002518,3.55e-10,17 | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.43e-08;10!UBERON:0007687;3.43e-08;10!UBERON:0009847;2.79e-07;3!UBERON:0003353;2.79e-07;3 | |||
|ontology_enrichment_disease=DOID:305!1.18e-13!106;DOID:0050687!4.01e-08!143;DOID:299!4.17e-08!25 | |ontology_enrichment_disease=DOID:305!1.18e-13!106;DOID:0050687!4.01e-08!143;DOID:299!4.17e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:4468;2.72e-10;2!DOID:4929;2.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.27e-10,2;DOID:4468,3.27e-10,2;DOID:305,4.97e-08,106;DOID:7,9.31e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0000466!5.39e-07!126;UBERON:0001007!7.04e-07!155;UBERON:0001555!7.04e-07!155;UBERON:0007026!7.04e-07!155;UBERON:0003886!7.76e-07!63 | |ontology_enrichment_uberon=UBERON:0000466!5.39e-07!126;UBERON:0001007!7.04e-07!155;UBERON:0001555!7.04e-07!155;UBERON:0007026!7.04e-07!155;UBERON:0003886!7.76e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.23e-07;24!UBERON:0011143;2.23e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,7.56e-07,26;UBERON:0003918,7.56e-07,26;UBERON:0011143,7.56e-07,26;UBERON:0005095,7.56e-07,26;UBERON:0007687,7.56e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,1.01392563272577,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.516628905878827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0.462092022626489,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,2.14825409610731,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0.640358984218058,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.412079291905832,0.202210631562555,0.984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8169524880672,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467426619694449,0,0.568209015825267,0.50313580350515,0.889811221596536,4.34796129954155,0.302461847526478,0.15543720058278,0,0.318593534327405,1.79921244865442,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65471377237555,0,0,0,0.840816489941367,0,1.51149313853035,2.8665101273223,0,0,0,0,0,0.207216164163037,0,0,0,0.946656005844523,0.681707238073262,0,0,0.31020638566432,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0.730336388246517,0,0,0,0,0,0,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0,0,0,1.79650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,1.01392563272577,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.516628905878827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0.462092022626489,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,2.14825409610731,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0,0.0801588202515337,0.640358984218058,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.412079291905832,0.202210631562555,0.984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8169524880672,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467426619694449,0,0.568209015825267,0.50313580350515,0.889811221596536,4.34796129954155,0.302461847526478,0.15543720058278,0,0.318593534327405,1.79921244865442,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65471377237555,0,0,0,0.840816489941367,0,1.51149313853035,2.8665101273223,0,0,0,0,0,0.207216164163037,0,0,0,0.946656005844523,0.681707238073262,0,0,0.31020638566432,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0.730336388246517,0,0,0,0,0,0,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358611026963382,0,0,0,0,1.79650404213174,0,0,0,0,0,0 | ||
|short_description=p14@GCNT3 | |short_description=p14@GCNT3 | ||
}} | }} |
Latest revision as of 09:07, 18 September 2015
Short description: | p14@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_GCNT3_5end |
Coexpression cluster: | C1211_small_lung_bile_clear_colon_rectal_tubular |
Association with transcript: | 50bp_to_ENST00000396065, ENST00000560585_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | O95395 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.55e-10 | 17 |
kidney epithelial cell | 3.55e-10 | 17 |
Ontology term | p-value | n |
---|---|---|
kidney | 7.56e-07 | 26 |
kidney mesenchyme | 7.56e-07 | 26 |
upper urinary tract | 7.56e-07 | 26 |
kidney rudiment | 7.56e-07 | 26 |
kidney field | 7.56e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.27e-10 | 2 |
clear cell adenocarcinoma | 3.27e-10 | 2 |
carcinoma | 4.97e-08 | 106 |
disease of anatomical entity | 9.31e-08 | 39 |