FFCP PHASE1:Hg19::chr3:45596863..45596884,+: Difference between revisions
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|id=chr3:45596863..45596884,+
|short_description=p13@LIMD1
|description=CAGE_peak_13_at_LIMD1_5end
|association_with_transcript=-1bp_to_ENST00000465039_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8994 | |EntrezGene=8994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6612 | |HGNC=6612 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000465039_5end | |||
|cluster_id=chr3:45596863..45596884,+ | |||
|coexpression_cluster_id=C289 | |||
|description=CAGE_peak_13_at_LIMD1_5end | |||
|id=chr3:45596863..45596884,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.23e-50!3;CL:0000039!2.35e-10!7;CL:0000586!2.35e-10!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.62e-34;3!CL:0000349;1.84e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.33e-34,3;CL:0000349,1.77e-12,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.93e-26;1 | |||
|ontology_enrichment_disease=DOID:1799!1.44e-17!1;DOID:10165!1.44e-17!1;DOID:1798!1.44e-17!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!2.23e-50!3;UBERON:0000920!2.23e-50!3;UBERON:0003124!2.80e-38!7;UBERON:0005631!1.08e-29!14;UBERON:0000158!1.08e-29!14;UBERON:0000478!2.15e-17!24;UBERON:0003127!2.02e-09!2;UBERON:0004923!2.42e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.62e-34;3!UBERON:0000920;3.62e-34;3!UBERON:0005631;5.53e-23;10!UBERON:0000158;5.53e-23;10!UBERON:0000478;5.68e-17;24!UBERON:0001987;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.33e-34,3;UBERON:0003124,1.35e-32,7;UBERON:0005631,1.04e-28,14;UBERON:0000158,1.04e-28,14;UBERON:0000478,5.45e-17,24;UBERON:0001987,1.69e-07,4;UBERON:0004340,1.69e-07,4 | |||
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|short_description=p13@LIMD1 | |||
}} | }} |
Latest revision as of 09:08, 18 September 2015
Short description: | p13@LIMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LIMD1_5end |
Coexpression cluster: | C289_chorionic_skeletal_heart_Mast_amniotic_granulosa_left |
Association with transcript: | -1bp_to_ENST00000465039_5end |
EntrezGene: | LIMD1 |
HGNC: | 6612 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.33e-34 | 3 |
extraembryonic cell | 1.77e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.33e-34 | 3 |
chorion | 1.35e-32 | 7 |
extraembryonic membrane | 1.04e-28 | 14 |
membranous layer | 1.04e-28 | 14 |
extraembryonic structure | 5.45e-17 | 24 |
placenta | 1.69e-07 | 4 |
allantois | 1.69e-07 | 4 |