FFCP PHASE1:Hg19::chr3:45636219..45636258,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8994 | |EntrezGene=8994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6612 | |HGNC=6612 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UGP4 | |UniProt=Q9UGP4 | ||
|association_with_transcript=-64bp_to_NM_014240,uc003coq.2_5end | |association_with_transcript=-64bp_to_NM_014240,uc003coq.2_5end | ||
|cluster_id=chr3:45636219..45636258,+ | |||
|description=CAGE_peak_4_at_LIMD1_5end | |description=CAGE_peak_4_at_LIMD1_5end | ||
|id=chr3:45636219..45636258,+ | |id=chr3:45636219..45636258,+ | ||
|ontology_enrichment_celltype=CL:0000860!5.45e-08!45;CL:0002057!2.89e-07!42 | |ontology_enrichment_celltype=CL:0000860!5.45e-08!45;CL:0002057!2.89e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.27e-08,42;CL:0002057,4.27e-08,42;CL:0000473,5.78e-08,48;CL:0000234,5.78e-08,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.39e-07!80 | |ontology_enrichment_uberon=UBERON:0002371!5.39e-07!80 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.83e-07,76 | |||
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| ||
|short_description=p4@LIMD1 | |short_description=p4@LIMD1 | ||
}} | }} |
Latest revision as of 09:12, 18 September 2015
Short description: | p4@LIMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LIMD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -64bp_to_NM_014240, uc003coq.2_5end |
EntrezGene: | LIMD1 |
HGNC: | 6612 |
UniProt: | Q9UGP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.27e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.27e-08 | 42 |
defensive cell | 5.78e-08 | 48 |
phagocyte | 5.78e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.83e-07 | 76 |