FFCP PHASE1:Hg19::chr2:73869543..73869560,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9027 | |EntrezGene=9027 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18069 | |HGNC=18069 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHE5 | |UniProt=Q9UHE5 | ||
|association_with_transcript=-6bp_to_NM_003960,uc002sji.1_5end | |association_with_transcript=-6bp_to_NM_003960,uc002sji.1_5end | ||
|cluster_id=chr2:73869543..73869560,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_2_at_NAT8_5end | |description=CAGE_peak_2_at_NAT8_5end | ||
|id=chr2:73869543..73869560,- | |id=chr2:73869543..73869560,- | ||
|ontology_enrichment_celltype=CL:0000181!1.03e-46!12;CL:0000417!1.03e-46!12;CL:0000668!1.03e-46!12;CL:0000414!1.03e-46!12;CL:0000412!1.03e-46!12;CL:0000182!1.03e-46!12;CL:0002379!5.38e-13!1;CL:0000223!9.24e-12!59 | |ontology_enrichment_celltype=CL:0000181!1.03e-46!12;CL:0000417!1.03e-46!12;CL:0000668!1.03e-46!12;CL:0000414!1.03e-46!12;CL:0000412!1.03e-46!12;CL:0000182!1.03e-46!12;CL:0002379!5.38e-13!1;CL:0000223!9.24e-12!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;8.12e-21;10!UBERON:0007687;8.12e-21;10!UBERON:0003104;1.15e-07;31 | |||
|ontology_enrichment_disease=DOID:3620!5.38e-13!1;DOID:3565!5.38e-13!1;DOID:7!2.61e-07!39 | |ontology_enrichment_disease=DOID:3620!5.38e-13!1;DOID:3565!5.38e-13!1;DOID:7!2.61e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.67e-38!19;UBERON:0006925!2.67e-38!19;UBERON:0008836!2.67e-38!19;UBERON:0008835!5.48e-33!22;UBERON:0003894!5.48e-33!22;UBERON:0009854!1.59e-31!23;UBERON:0007499!6.02e-29!25;UBERON:0009497!6.02e-29!25;UBERON:0000015!6.02e-29!25;UBERON:0002423!6.02e-29!25;UBERON:0006235!6.02e-29!25;UBERON:0004161!6.02e-29!25;UBERON:0005057!8.32e-28!26;UBERON:0009856!8.32e-28!26;UBERON:0005172!2.51e-24!55;UBERON:0005173!2.51e-24!55;UBERON:0002365!3.32e-23!31;UBERON:0002330!3.32e-23!31;UBERON:0002417!8.41e-22!61;UBERON:0000916!8.41e-22!61;UBERON:0002368!1.82e-20!35;UBERON:0003929!2.19e-16!54;UBERON:0000949!9.58e-16!45;UBERON:0005177!8.07e-12!107;UBERON:0002530!8.19e-12!59;UBERON:0009569!4.10e-11!113;UBERON:0005911!1.97e-10!82;UBERON:0004921!1.14e-07!129;UBERON:0004185!1.14e-07!129;UBERON:0001041!9.19e-07!98 | |ontology_enrichment_uberon=UBERON:0002107!2.67e-38!19;UBERON:0006925!2.67e-38!19;UBERON:0008836!2.67e-38!19;UBERON:0008835!5.48e-33!22;UBERON:0003894!5.48e-33!22;UBERON:0009854!1.59e-31!23;UBERON:0007499!6.02e-29!25;UBERON:0009497!6.02e-29!25;UBERON:0000015!6.02e-29!25;UBERON:0002423!6.02e-29!25;UBERON:0006235!6.02e-29!25;UBERON:0004161!6.02e-29!25;UBERON:0005057!8.32e-28!26;UBERON:0009856!8.32e-28!26;UBERON:0005172!2.51e-24!55;UBERON:0005173!2.51e-24!55;UBERON:0002365!3.32e-23!31;UBERON:0002330!3.32e-23!31;UBERON:0002417!8.41e-22!61;UBERON:0000916!8.41e-22!61;UBERON:0002368!1.82e-20!35;UBERON:0003929!2.19e-16!54;UBERON:0000949!9.58e-16!45;UBERON:0005177!8.07e-12!107;UBERON:0002530!8.19e-12!59;UBERON:0009569!4.10e-11!113;UBERON:0005911!1.97e-10!82;UBERON:0004921!1.14e-07!129;UBERON:0004185!1.14e-07!129;UBERON:0001041!9.19e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.51e-09;24!UBERON:0011143;2.51e-09;24!UBERON:0000489;6.79e-08;29!UBERON:0006554;1.15e-07;30!UBERON:0001008;1.15e-07;30!UBERON:0005172;1.18e-07;52!UBERON:0005173;1.18e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.82e-09,54;UBERON:0005173,3.82e-09,54;UBERON:0002113,1.07e-08,26;UBERON:0003918,1.07e-08,26;UBERON:0011143,1.07e-08,26;UBERON:0005095,1.07e-08,26;UBERON:0007687,1.07e-08,26;UBERON:0002417,2.58e-08,60;UBERON:0000916,2.58e-08,60;UBERON:0000489,1.86e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81605012320082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,10.5599647780926,1.62609223218494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81605012320082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,10.5599647780926,1.62609223218494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@NAT8 | |short_description=p2@NAT8 | ||
}} | }} |
Latest revision as of 09:35, 18 September 2015
Short description: | p2@NAT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAT8_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -6bp_to_NM_003960, uc002sji.1_5end |
EntrezGene: | NAT8 |
HGNC: | 18069 |
UniProt: | Q9UHE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 3.82e-09 | 54 |
abdominal segment element | 3.82e-09 | 54 |
kidney | 1.07e-08 | 26 |
kidney mesenchyme | 1.07e-08 | 26 |
upper urinary tract | 1.07e-08 | 26 |
kidney rudiment | 1.07e-08 | 26 |
kidney field | 1.07e-08 | 26 |
abdominal segment of trunk | 2.58e-08 | 60 |
abdomen | 2.58e-08 | 60 |
cavitated compound organ | 1.86e-07 | 31 |