FFCP PHASE1:Hg19::chr5:64858944..64859002,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64105 | |EntrezGene=64105 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29479 | |HGNC=29479 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BS16,D6RHD3,D6RJF0,D6RBN6,D6RC76 | |UniProt=Q9BS16,D6RHD3,D6RJF0,D6RBN6,D6RC76 | ||
|association_with_transcript=0bp_to_ENST00000396679,ENST00000504508,ENST00000506282,ENST00000508311,ENST00000508421,ENST00000510693,ENST00000510768,ENST00000514814,ENST00000515497,ENST00000515873,NM_022145,uc003jts.2,uc003jtt.2,uc003jtu.2_5end | |association_with_transcript=0bp_to_ENST00000396679,ENST00000504508,ENST00000506282,ENST00000508311,ENST00000508421,ENST00000510693,ENST00000510768,ENST00000514814,ENST00000515497,ENST00000515873,NM_022145,uc003jts.2,uc003jtt.2,uc003jtu.2_5end | ||
|cluster_id=chr5:64858944..64859002,- | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_CENPK_5end | |description=CAGE_peak_1_at_CENPK_5end | ||
|id=chr5:64858944..64859002,- | |id=chr5:64858944..64859002,- | ||
|ontology_enrichment_celltype=CL:0000003!1.66e-09!722;CL:0000012!4.24e-08!682;CL:0000548!5.10e-08!679;CL:0000004!5.10e-08!679;CL:0000255!5.10e-08!679;CL:0000542!3.27e-07!53;CL:0000051!3.27e-07!53;CL:0002319!6.60e-07!25;CL:0000838!7.96e-07!52 | |ontology_enrichment_celltype=CL:0000003!1.66e-09!722;CL:0000012!4.24e-08!682;CL:0000548!5.10e-08!679;CL:0000004!5.10e-08!679;CL:0000255!5.10e-08!679;CL:0000542!3.27e-07!53;CL:0000051!3.27e-07!53;CL:0002319!6.60e-07!25;CL:0000838!7.96e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0002319;6.75e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.20e-07,53;CL:0000051,3.20e-07,53;CL:0002319,6.46e-07,25;CL:0000838,7.80e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.29e-49!235;DOID:14566!1.61e-47!239;DOID:0050686!4.49e-26!137;DOID:2531!2.51e-21!51;DOID:0060083!2.51e-21!51;DOID:0050687!4.46e-21!143;DOID:1240!7.08e-17!39;DOID:305!7.65e-16!106;DOID:8692!6.18e-13!31 | |ontology_enrichment_disease=DOID:162!6.29e-49!235;DOID:14566!1.61e-47!239;DOID:0050686!4.49e-26!137;DOID:2531!2.51e-21!51;DOID:0060083!2.51e-21!51;DOID:0050687!4.46e-21!143;DOID:1240!7.08e-17!39;DOID:305!7.65e-16!106;DOID:8692!6.18e-13!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.20e-13;39!DOID:2531;2.51e-13;51!DOID:0060083;2.51e-13;51!DOID:8692;1.04e-12;31!DOID:0050686;7.16e-07;137 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.50e-49,235;DOID:14566,1.46e-47,239;DOID:0050686,4.09e-26,137;DOID:2531,2.33e-21,51;DOID:0060083,2.33e-21,51;DOID:0050687,3.68e-21,143;DOID:1240,6.68e-17,39;DOID:305,7.25e-16,106;DOID:8692,5.92e-13,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CENPK | |short_description=p1@CENPK | ||
}} | }} |
Latest revision as of 10:17, 18 September 2015
Short description: | p1@CENPK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CENPK_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000396679, ENST00000504508, ENST00000506282, ENST00000508311, ENST00000508421, ENST00000510693, ENST00000510768, ENST00000514814, ENST00000515497, ENST00000515873, NM_022145, uc003jts.2, uc003jtt.2, uc003jtu.2_5end |
EntrezGene: | CENPK |
HGNC: | 29479 |
UniProt: | Q9BS16D6RHD3D6RJF0D6RBN6D6RC76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.20e-07 | 53 |
common lymphoid progenitor | 3.20e-07 | 53 |
neural cell | 6.46e-07 | 25 |
lymphoid lineage restricted progenitor cell | 7.80e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.50e-49 | 235 |
disease of cellular proliferation | 1.46e-47 | 239 |
organ system cancer | 4.09e-26 | 137 |
hematologic cancer | 2.33e-21 | 51 |
immune system cancer | 2.33e-21 | 51 |
cell type cancer | 3.68e-21 | 143 |
leukemia | 6.68e-17 | 39 |
carcinoma | 7.25e-16 | 106 |
myeloid leukemia | 5.92e-13 | 31 |