FFCP PHASE1:Hg19::chr16:88901909..88901912,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2588 | |EntrezGene=2588 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=4122 | |HGNC=4122 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9HAL1 | |UniProt=Q9HAL1 | ||
|association_with_transcript=-213bp_to_AK021488_5end | |association_with_transcript=-213bp_to_AK021488_5end | ||
|cluster_id=chr16:88901909..88901912,- | |||
|description=CAGE_peak_4_at_GALNS_5end | |description=CAGE_peak_4_at_GALNS_5end | ||
|id=chr16:88901909..88901912,- | |id=chr16:88901909..88901912,- | ||
Latest revision as of 10:25, 18 September 2015
| Short description: | p4@GALNS |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_GALNS_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -213bp_to_AK021488_5end |
| EntrezGene: | GALNS |
| HGNC: | 4122 |
| UniProt: | Q9HAL1 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@GALNS |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| astrocyte of the cerebellum | 3.11e-27 | 3 |
| oligodendrocyte | 2.82e-12 | 7 |
| macroglial cell | 2.82e-12 | 7 |
| astrocyte | 2.82e-12 | 7 |
| oligodendrocyte precursor cell | 2.82e-12 | 7 |
| osteoblast | 3.03e-08 | 11 |
| osteoprogenitor cell | 3.03e-08 | 11 |
| mesenchyme condensation cell | 3.03e-08 | 11 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| vagina | 6.31e-21 | 1 |
| cerebellum | 3.71e-14 | 6 |
| rhombic lip | 3.71e-14 | 6 |
| regional part of metencephalon | 9.24e-10 | 9 |
| metencephalon | 9.24e-10 | 9 |
| future metencephalon | 9.24e-10 | 9 |
| gallbladder | 8.29e-08 | 3 |
| gall bladder primordium | 8.29e-08 | 3 |
| segmental subdivision of hindbrain | 1.52e-07 | 12 |
| hindbrain | 1.52e-07 | 12 |
Showing 1 to 10 of 13 entries
