FFCP PHASE1:Hg19::chr4:71532209..71532244,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3512 | |EntrezGene=3512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5713 | |HGNC=5713 | ||
|TSSclassifier=strong | |||
|UniProt=D6RHJ6 | |UniProt=D6RHJ6 | ||
|association_with_transcript=0bp_to_ENST00000391614_5end | |association_with_transcript=0bp_to_ENST00000391614_5end | ||
|cluster_id=chr4:71532209..71532244,- | |||
|coexpression_cluster_id=C1273 | |||
|description=CAGE_peak_1_at_IGJ_5end | |description=CAGE_peak_1_at_IGJ_5end | ||
|id=chr4:71532209..71532244,- | |id=chr4:71532209..71532244,- | ||
|ontology_enrichment_celltype=CL:0000738!2.03e-24!140;CL:0002087!3.92e-21!119;CL:0000037!2.73e-20!172;CL:0000566!2.73e-20!172;CL:0000945!1.57e-19!24;CL:0000826!1.57e-19!24;CL:0002032!1.72e-17!165;CL:0000837!1.72e-17!165;CL:0000988!2.28e-17!182;CL:0002031!9.54e-17!124;CL:0000542!2.62e-14!53;CL:0000051!2.62e-14!53;CL:0000236!7.50e-14!14;CL:0000838!1.30e-13!52;CL:0002057!2.43e-09!42;CL:0000766!2.77e-08!76;CL:0000860!4.40e-08!45;CL:0002194!7.07e-07!63;CL:0000576!7.07e-07!63;CL:0000040!7.07e-07!63;CL:0000559!7.07e-07!63;CL:0002009!8.80e-07!65 | |ontology_enrichment_celltype=CL:0000738!2.03e-24!140;CL:0002087!3.92e-21!119;CL:0000037!2.73e-20!172;CL:0000566!2.73e-20!172;CL:0000945!1.57e-19!24;CL:0000826!1.57e-19!24;CL:0002032!1.72e-17!165;CL:0000837!1.72e-17!165;CL:0000988!2.28e-17!182;CL:0002031!9.54e-17!124;CL:0000542!2.62e-14!53;CL:0000051!2.62e-14!53;CL:0000236!7.50e-14!14;CL:0000838!1.30e-13!52;CL:0002057!2.43e-09!42;CL:0000766!2.77e-08!76;CL:0000860!4.40e-08!45;CL:0002194!7.07e-07!63;CL:0000576!7.07e-07!63;CL:0000040!7.07e-07!63;CL:0000559!7.07e-07!63;CL:0002009!8.80e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.43e-29;24!CL:0000236;6.52e-19;13!CL:0000542;9.30e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.48e-29,24;CL:0000826,3.48e-29,24;CL:0000236,3.50e-20,14;CL:0000738,6.81e-14,136;CL:0000542,8.04e-14,53;CL:0000051,8.04e-14,53;CL:0000838,6.31e-13,52;CL:0000037,1.39e-12,168;CL:0002087,1.45e-11,115;CL:0000988,4.12e-11,177;CL:0002032,1.08e-09,161;CL:0000837,1.08e-09,161;CL:0002031,6.88e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000051;9.30e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.95e-32!115;UBERON:0002390!7.37e-10!102;UBERON:0003061!7.37e-10!102;UBERON:0002193!7.82e-09!112;UBERON:0000178!3.23e-07!15;UBERON:0000179!3.23e-07!15;UBERON:0000463!3.23e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!5.95e-32!115;UBERON:0002390!7.37e-10!102;UBERON:0003061!7.37e-10!102;UBERON:0002193!7.82e-09!112;UBERON:0000178!3.23e-07!15;UBERON:0000179!3.23e-07!15;UBERON:0000463!3.23e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.98e-11;15!UBERON:0000179;5.98e-11;15!UBERON:0000463;5.98e-11;15!UBERON:0002390;1.39e-08;32!UBERON:0007023;1.46e-08;114!UBERON:0004177;3.57e-07;5!UBERON:0005057;3.57e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.46e-32,114;UBERON:0000178,5.99e-11,15;UBERON:0000179,5.99e-11,15;UBERON:0000463,5.99e-11,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,90.1678187825825,88.9149383742913,100.671089300196,5.11373559903575,36.079963421138,24.1513152373079,0,0,0,1221.8901547531,1167.77807565168,27.5984412974756,0,0.601633342410425,0.217010870715852,5.37397138175818,178.789303642477,2.06060454107349,0.436194716338694,0,0.242584061187816,0.464858073811369,2.87817521615278,0.309706370895104,0.863077176966451,1.2808035326455,1.18241114944293,0.689491361473237,0,1.35426486594342,1.31769637679823,0,0.898893937780338,0.612167784741805,1.60464513538047,0,0.329851300186716,0.997318288108159,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,1.50749199154046,1.0429658368404,0.217188844705117,39.9563671738023,1.84138817993782,0.949387162322653,0.633765858935825,0.425208599930087,1.04829322754188,0,0,0.32145117339416,0.855038231223746,0.59675003159727,0.547992461293902,2463.94742245852,1587.62494293902,1766.56537817302,2263.37710049275,1430.61486167967,1931.74295068702,1630.79770116025,1971.07505687006,182.717363084133,398.734051582867,412.090539918997,113.667342577962,18.4967825783907,33.9765469359849,0.393419540227666,0,0.411202997999018,0.167186495390678,0.977766799900771,0.473447805734733,0,0.779873198196215,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0,0,0,0.444859689486181,0.802622484269139,1.04535523804977,0.339928028092699,0,0,0,1.59282707162048,0,0,4.06552821509986,1.27986611154418,2.49861453104692,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0.087834785693126,85.0709095357644,0,0,0,0.348259474598534,0.664789802594326,1210.81689959822,1899.5950987008,931.986870835878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640672166455702,0.423863802319124,0,0.206105058476878,0,0.744467425326359,0.168776332241266,0.292311015483596,0,0.552299391853796,0,0.710019185033229,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8159062679296,46.1928791838484,12.9973779469909,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,2.71295439353627,14.816068796205,4.99864955910285,1.2162378064119,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0.197030760201927,0.215627574859517,0.641715181398742,0,0,0,0,0,3.74503511973591,2.99161459204025,1.65766205374414,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,44.6618936425437,25.4542756965968,23.6935178323646,0,0,0,0.496215615637554,0,0,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,133.953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,131.51888968516,0,0,0,0,65.968189200182,44.3489580142578,48.4200109098038,234.181835275007,183.467573796443,42.7992385387193,45.9026721652398,46.794385401362,0,0,0,761.978821190572,6.34784537096357,0,0,0,65.6863419554018,0.423347165447766,0,2.24637742490767,24.4211106565516,0,5.01268954180134,2.53937666702405,0.481764225311099,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7343250420468,0,0,0,0,0.890894042497916,0,0,0,0,0,0,215.187827311155,1676.76708335854,0,0,768.78769490984,0,0,0,0,162.071115461482,227.508937729593,0,0,0.834912883456661,1.99613798001194,0,0,163.849904048263,0,0,0,0,0,0,0,0,0,0.110579259931225,0,2.19385397153973,0,0,194.607203756103,0,0,0,0,0.31900115973192,0.641183153813036,0,0,9.88975615288656,0,0,0,0,0,0,0,0,0,2.380275037163,653.887088718578,2853.90640357123,9.16545217400438,0,0,0,10.3797744790243,3.21031058919516,0,811.923812009714,0,0,0.789168805698781,7.25944296291983,0,414.883081840652,0,0,0,0,0,0,0,0,0,0,0,6.63961339319714,0,0,0,0,206.19864905438,0,0.451961481561065,0,0,0.443175571691151,0,0,595.106949333315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.279282401272254,1.83328339209347,2.87149209830726,2.79550600698588,5.57993862577542,4.9097720637212,0.806201669840715,0,0,0,0,0,0,4.82637992774971,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0,126.246743093315,0.419636705079985,0,0,0,15.7232971802141,9.26928758511604,0,0,1.72844298240254,0,0,0,0,0,70.9312811001919,1.32506888912221,0,0,0,0,529.45199151063,1.41483874589699,586.976741426976,798.331129095429,991.615168863884,325.308030275373,0,2.72008901684737,0,9.19036730290385,0,0,0,0.244052529803926,0,0,1.22021956690538,1.42821726765182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.797189041880179,0.163565394255844,0,0,0,0.79994958341972,0,0,0,0.184105950251841,0,1.86623178009892,0.127894371303652,0,0,0,0,0,0,0,0,1.41951141002256,0,0,0,0.321146125482298,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,91.4557592726968,0,61.7396068874143,0,0,0,0.337687923091973,0.781078098613847,0,0.126831620387814,0,925.459110454924,143.405030554506,0.175871244359621,0,0,2.01770233331294,2.42786241694653,2.27662191351298,0.975726071789027,458.285568509334,0,0.40781839786099,0.263091094251396,0,0,39.246546425257,0.314231179832004,0,3.65263488203798,0,0,59.5399612991547,0,1.85986280589,0,0,0,0,0,511.11010227849,0,0,205.766106392791,0,0,0,0,0,0,0.647428837187895,1.43727929598746,1.1598144313382,3.88568794447312,0,0,0,0,0,0,2411.84678918949,4.5897507705831,0,9.0704879048945,0,0.196308467114945,0,0,0,1089.93149681236,40.0283484315914,360.287867109369,0,0,0,0,1822.07271368284,0.430018749454354,0,0.135982980381829,0.872701380680755,11.1095636508234,0.743990036333503,0.924351257262837,0,0,0,0,0,0,0,0,66.0790248463048,8.57485216499771,0,1.13776295448085,1480.05706837471,0.476128862927481,33.9091776639032,13.1598394307219,0.33639558774184,25.458863311266,0.606351566874658,246.890792115154,0.342233301085281,648.128806159376,657.979512272413,0.99798106963804,0,0,0,0,2.34640942403454,7.21224520678912,0.813792356631477,1.99727032255654,218.180792252672,67.3193833836789 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,90.1678187825825,88.9149383742913,100.671089300196,5.11373559903575,36.079963421138,24.1513152373079,0,0,0,1221.8901547531,1167.77807565168,27.5984412974756,0,0.601633342410425,0.217010870715852,5.37397138175818,178.789303642477,2.06060454107349,0.436194716338694,0,0.242584061187816,0.464858073811369,2.87817521615278,0.309706370895104,0.863077176966451,1.2808035326455,1.18241114944293,0.689491361473237,0,1.35426486594342,1.31769637679823,0,0.898893937780338,0.612167784741805,1.60464513538047,0,0.329851300186716,0.997318288108159,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,1.50749199154046,1.0429658368404,0.217188844705117,39.9563671738023,1.84138817993782,0.949387162322653,0.633765858935825,0.425208599930087,1.04829322754188,0,0,0.32145117339416,0.855038231223746,0.59675003159727,0.547992461293902,2463.94742245852,1587.62494293902,1766.56537817302,2263.37710049275,1430.61486167967,1931.74295068702,1630.79770116025,1971.07505687006,182.717363084133,398.734051582867,412.090539918997,113.667342577962,18.4967825783907,33.9765469359849,0.393419540227666,0,0.411202997999018,0.167186495390678,0.977766799900771,0.473447805734733,0,0.779873198196215,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0,0,0,0.444859689486181,0.802622484269139,1.04535523804977,0.339928028092699,0,0,0,1.59282707162048,0,0,4.06552821509986,1.27986611154418,2.49861453104692,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0.087834785693126,85.0709095357644,0,0,0,0.348259474598534,0.664789802594326,1210.81689959822,1899.5950987008,931.986870835878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640672166455702,0.423863802319124,0,0.206105058476878,0,0.744467425326359,0.168776332241266,0.292311015483596,0,0.552299391853796,0,0.710019185033229,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.8159062679296,46.1928791838484,12.9973779469909,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,2.71295439353627,14.816068796205,4.99864955910285,1.2162378064119,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0.197030760201927,0.215627574859517,0.641715181398742,0,0,0,0,0,3.74503511973591,2.99161459204025,1.65766205374414,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,44.6618936425437,25.4542756965968,23.6935178323646,0,0,0,0.496215615637554,0,0,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,133.953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,131.51888968516,0,0,0,0,65.968189200182,44.3489580142578,48.4200109098038,234.181835275007,183.467573796443,42.7992385387193,45.9026721652398,46.794385401362,0,0,0,761.978821190572,6.34784537096357,0,0,0,65.6863419554018,0.423347165447766,0,2.24637742490767,24.4211106565516,0,5.01268954180134,2.53937666702405,0.481764225311099,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7343250420468,0,0,0,0,0.890894042497916,0,0,0,0,0,0,215.187827311155,1676.76708335854,0,0,768.78769490984,0,0,0,0,162.071115461482,227.508937729593,0,0,0.834912883456661,1.99613798001194,0,0,163.849904048263,0,0,0,0,0,0,0,0,0,0.110579259931225,0,2.19385397153973,0,0,194.607203756103,0,0,0,0,0.31900115973192,0.641183153813036,0,0,9.88975615288656,0,0,0,0,0,0,0,0,0,2.380275037163,653.887088718578,2853.90640357123,9.16545217400438,0,0,0,10.3797744790243,3.21031058919516,0,811.923812009714,0,0,0.789168805698781,7.25944296291983,0,414.883081840652,0,0,0,0,0,0,0,0,0,0,0,6.63961339319714,0,0,0,0,206.19864905438,0,0.451961481561065,0,0,0.443175571691151,0,0,595.106949333315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.279282401272254,1.83328339209347,2.87149209830726,2.79550600698588,5.57993862577542,4.9097720637212,0.806201669840715,0,0,0,0,0,0,4.82637992774971,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0,126.246743093315,0.419636705079985,0,0,0,15.7232971802141,9.26928758511604,0,0,1.72844298240254,0,0,0,0,0,70.9312811001919,1.32506888912221,0,0,0,0,529.45199151063,1.41483874589699,586.976741426976,798.331129095429,991.615168863884,325.308030275373,0,2.72008901684737,0,9.19036730290385,0,0,0,0.244052529803926,0,0,1.22021956690538,1.42821726765182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.797189041880179,0.163565394255844,0,0,0,0.79994958341972,0,0,0,0.184105950251841,0,1.86623178009892,0.127894371303652,0,0,0,0,0,0,0,0,1.41951141002256,0,0,0,0.321146125482298,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,91.4557592726968,0,61.7396068874143,0,0,0,0.337687923091973,0.781078098613847,0,0.126831620387814,0,925.459110454924,143.405030554506,0.175871244359621,0,0,2.01770233331294,2.42786241694653,2.27662191351298,0.975726071789027,458.285568509334,0,0.40781839786099,0.263091094251396,0,0,39.246546425257,0.314231179832004,0,3.65263488203798,0,0,59.5399612991547,0,1.85986280589,0,0,0,0,0,511.11010227849,0,0,205.766106392791,0,0,0,0,0,0,0.647428837187895,1.43727929598746,1.1598144313382,3.88568794447312,0,0,0,0,0,0,2411.84678918949,4.5897507705831,0,9.0704879048945,0,0.196308467114945,0,0,0,1089.93149681236,40.0283484315914,360.287867109369,0,0,0,0,1822.07271368284,0.430018749454354,0,0.135982980381829,0.872701380680755,11.1095636508234,0.743990036333503,0.924351257262837,0,0,0,0,0,0,0,0,66.0790248463048,8.57485216499771,0,1.13776295448085,1480.05706837471,0.476128862927481,33.9091776639032,13.1598394307219,0.33639558774184,25.458863311266,0.606351566874658,246.890792115154,0.342233301085281,648.128806159376,657.979512272413,0.99798106963804,0,0,0,0,2.34640942403454,7.21224520678912,0.813792356631477,1.99727032255654,218.180792252672,67.3193833836789 | ||
|short_description=p1@IGJ | |short_description=p1@IGJ | ||
}} | }} |
Latest revision as of 10:57, 18 September 2015
Short description: | p1@IGJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGJ_5end |
Coexpression cluster: | C1273_colon_CD19_small_Dendritic_submaxillary_appendix_throat |
Association with transcript: | 0bp_to_ENST00000391614_5end |
EntrezGene: | IGJ |
HGNC: | 5713 |
UniProt: | D6RHJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.48e-29 | 24 |
pro-B cell | 3.48e-29 | 24 |
B cell | 3.50e-20 | 14 |
leukocyte | 6.81e-14 | 136 |
lymphocyte | 8.04e-14 | 53 |
common lymphoid progenitor | 8.04e-14 | 53 |
lymphoid lineage restricted progenitor cell | 6.31e-13 | 52 |
hematopoietic stem cell | 1.39e-12 | 168 |
nongranular leukocyte | 1.45e-11 | 115 |
hematopoietic cell | 4.12e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.08e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 6.88e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.46e-32 | 114 |
blood | 5.99e-11 | 15 |
haemolymphatic fluid | 5.99e-11 | 15 |
organism substance | 5.99e-11 | 15 |