FFCP PHASE1:Hg19::chr4:71532616..71532662,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3512 | |EntrezGene=3512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5713 | |HGNC=5713 | ||
|TSSclassifier=strong | |||
|UniProt=D6RD17 | |UniProt=D6RD17 | ||
|association_with_transcript=-15bp_to_ENST00000510614_5end | |association_with_transcript=-15bp_to_ENST00000510614_5end | ||
|cluster_id=chr4:71532616..71532662,- | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_5_at_IGJ_5end | |description=CAGE_peak_5_at_IGJ_5end | ||
|id=chr4:71532616..71532662,- | |id=chr4:71532616..71532662,- | ||
|ontology_enrichment_celltype=CL:0000945!8.25e-39!24;CL:0000826!8.25e-39!24;CL:0000236!1.79e-25!14;CL:0000542!6.76e-18!53;CL:0000051!6.76e-18!53;CL:0000838!2.20e-16!52;CL:0000784!2.06e-09!3;CL:0000738!1.22e-07!140;CL:0000037!2.75e-07!172;CL:0000566!2.75e-07!172;CL:0002087!7.22e-07!119 | |ontology_enrichment_celltype=CL:0000945!8.25e-39!24;CL:0000826!8.25e-39!24;CL:0000236!1.79e-25!14;CL:0000542!6.76e-18!53;CL:0000051!6.76e-18!53;CL:0000838!2.20e-16!52;CL:0000784!2.06e-09!3;CL:0000738!1.22e-07!140;CL:0000037!2.75e-07!172;CL:0000566!2.75e-07!172;CL:0002087!7.22e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.73e-41;13!CL:0000945;1.11e-40;24!CL:0000784;1.41e-15;3!CL:0000542;1.90e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.03e-40,24;CL:0000826,1.03e-40,24;CL:0000236,3.21e-38,14;CL:0000542,4.16e-19,53;CL:0000051,4.16e-19,53;CL:0000838,6.21e-17,52;CL:0000784,1.45e-15,3;CL:0000738,4.14e-08,136;CL:0002087,6.87e-08,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.90e-14;53 | |||
|ontology_enrichment_disease=DOID:0060058!4.45e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.24e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.16e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.11e-22!115;UBERON:0004177!2.13e-08!7;UBERON:0002106!8.80e-08!3;UBERON:0004854!8.80e-08!3;UBERON:0009034!8.80e-08!3;UBERON:0002095!8.80e-08!3;UBERON:0004782!8.80e-08!3;UBERON:0003281!8.80e-08!3;UBERON:0009664!8.80e-08!3;UBERON:0002296!8.80e-08!3;UBERON:0005602!8.80e-08!3;UBERON:0001179!8.80e-08!3;UBERON:0006293!8.80e-08!3;UBERON:0000178!3.99e-07!15;UBERON:0000179!3.99e-07!15;UBERON:0000463!3.99e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!1.11e-22!115;UBERON:0004177!2.13e-08!7;UBERON:0002106!8.80e-08!3;UBERON:0004854!8.80e-08!3;UBERON:0009034!8.80e-08!3;UBERON:0002095!8.80e-08!3;UBERON:0004782!8.80e-08!3;UBERON:0003281!8.80e-08!3;UBERON:0009664!8.80e-08!3;UBERON:0002296!8.80e-08!3;UBERON:0005602!8.80e-08!3;UBERON:0001179!8.80e-08!3;UBERON:0006293!8.80e-08!3;UBERON:0000178!3.99e-07!15;UBERON:0000179!3.99e-07!15;UBERON:0000463!3.99e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.31e-10;2!UBERON:0001044;1.01e-07;6!UBERON:0003293;1.01e-07;6!UBERON:0003294;1.01e-07;6!UBERON:0010047;1.01e-07;6!UBERON:0003408;1.01e-07;6!UBERON:0000167;1.01e-07;6!UBERON:0004921;9.10e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.41e-17,114;UBERON:0001829,1.31e-10,2;UBERON:0001044,1.03e-07,6;UBERON:0003293,1.03e-07,6;UBERON:0003294,1.03e-07,6;UBERON:0010047,1.03e-07,6;UBERON:0000167,1.03e-07,6;UBERON:0003408,1.33e-07,10 | |||
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| ||
|short_description=p5@IGJ | |short_description=p5@IGJ | ||
}} | }} |
Latest revision as of 11:00, 18 September 2015
Short description: | p5@IGJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IGJ_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | -15bp_to_ENST00000510614_5end |
EntrezGene: | IGJ |
HGNC: | 5713 |
UniProt: | D6RD17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.03e-40 | 24 |
pro-B cell | 1.03e-40 | 24 |
B cell | 3.21e-38 | 14 |
lymphocyte | 4.16e-19 | 53 |
common lymphoid progenitor | 4.16e-19 | 53 |
lymphoid lineage restricted progenitor cell | 6.21e-17 | 52 |
plasmacytoid dendritic cell | 1.45e-15 | 3 |
leukocyte | 4.14e-08 | 136 |
nongranular leukocyte | 6.87e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.41e-17 | 114 |
major salivary gland | 1.31e-10 | 2 |
saliva-secreting gland | 1.03e-07 | 6 |
gland of oral region | 1.03e-07 | 6 |
gland of foregut | 1.03e-07 | 6 |
oral gland | 1.03e-07 | 6 |
oral cavity | 1.03e-07 | 6 |
gland of gut | 1.33e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.16e-08 | 10 |