FFCP PHASE1:Hg19::chr21:40720573..40720585,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3150 | |EntrezGene=3150 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4984 | |HGNC=4984 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000482192_5end | |association_with_transcript=-24bp_to_ENST00000482192_5end | ||
|cluster_id=chr21:40720573..40720585,- | |||
|description=CAGE_peak_6_at_HMGN1_5end | |description=CAGE_peak_6_at_HMGN1_5end | ||
|id=chr21:40720573..40720585,- | |id=chr21:40720573..40720585,- | ||
|ontology_enrichment_celltype=CL:0000012!5.34e-07!682 | |ontology_enrichment_celltype=CL:0000012!5.34e-07!682 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.75e-12!51;DOID:0060083!2.75e-12!51;DOID:1240!7.59e-10!39;DOID:14566!1.55e-09!239;DOID:162!5.00e-09!235;DOID:0050686!1.08e-07!137;DOID:8692!1.66e-07!31 | |ontology_enrichment_disease=DOID:2531!2.75e-12!51;DOID:0060083!2.75e-12!51;DOID:1240!7.59e-10!39;DOID:14566!1.55e-09!239;DOID:162!5.00e-09!235;DOID:0050686!1.08e-07!137;DOID:8692!1.66e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;7.75e-09;39!DOID:2531;1.88e-08;51!DOID:0060083;1.88e-08;51!DOID:8692;4.51e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.50e-13,51;DOID:0060083,2.50e-13,51;DOID:1240,3.06e-11,39;DOID:0050686,2.16e-07,137;DOID:8692,4.52e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@HMGN1 | |short_description=p6@HMGN1 | ||
}} | }} |
Latest revision as of 11:13, 18 September 2015
Short description: | p6@HMGN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HMGN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000482192_5end |
EntrezGene: | HMGN1 |
HGNC: | 4984 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.50e-13 | 51 |
immune system cancer | 2.50e-13 | 51 |
leukemia | 3.06e-11 | 39 |
organ system cancer | 2.16e-07 | 137 |
myeloid leukemia | 4.52e-07 | 31 |