FFCP PHASE1:Hg19::chr17:80291818..80291846,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6398 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10707 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WVN6 | |||
|association_with_transcript=74bp_to_ENST00000269389,NM_003004,uc002keo.2,uc002kep.2_5end | |||
|cluster_id=chr17:80291818..80291846,- | |||
|description=CAGE_peak_3_at_SECTM1_5end | |||
|id=chr17:80291818..80291846,- | |||
|ontology_enrichment_celltype=CL:0000055!7.36e-17!180;CL:0000057!2.60e-13!75;CL:0000680!6.91e-08!57;CL:0000056!6.91e-08!57;CL:0000355!6.91e-08!57;CL:0000183!3.67e-07!59;CL:0000187!6.57e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002559;1.70e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.81e-11,76;CL:0002559,1.52e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.10e-15!95;UBERON:0000914!1.07e-12!83;UBERON:0002329!1.07e-12!83;UBERON:0003077!1.07e-12!83;UBERON:0003059!1.07e-12!83;UBERON:0007282!1.07e-12!83;UBERON:0009618!1.07e-12!83;UBERON:0007285!1.07e-12!83;UBERON:0004290!9.06e-10!70;UBERON:0003104!1.59e-09!238;UBERON:0009142!1.59e-09!238;UBERON:0004119!3.29e-09!169;UBERON:0000925!3.29e-09!169;UBERON:0006595!3.29e-09!169;UBERON:0001007!5.30e-09!155;UBERON:0001555!5.30e-09!155;UBERON:0007026!5.30e-09!155;UBERON:0000486!1.86e-08!82;UBERON:0002097!3.02e-08!40;UBERON:0002199!3.81e-08!45;UBERON:0002416!3.81e-08!45;UBERON:0005256!4.14e-08!143;UBERON:0002385!5.93e-08!63;UBERON:0001015!5.93e-08!63;UBERON:0000383!5.93e-08!63;UBERON:0001737!9.43e-08!9;UBERON:0000481!1.09e-07!347;UBERON:0001134!1.25e-07!61;UBERON:0002036!1.25e-07!61;UBERON:0003082!1.25e-07!61;UBERON:0000468!4.09e-07!659;UBERON:0000926!9.24e-07!448;UBERON:0004120!9.24e-07!448;UBERON:0006603!9.24e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.52e-12;9!UBERON:0001557;2.52e-12;9!UBERON:0004905;2.96e-09;8!UBERON:0000982;2.96e-09;8!UBERON:0004770;2.96e-09;8!UBERON:0011135;4.02e-08;5!UBERON:0002216;4.02e-08;5!UBERON:0011134;4.02e-08;5!UBERON:0002209;4.02e-08;5!UBERON:0002213;4.02e-08;5!UBERON:0007844;4.02e-08;5!UBERON:0011138;4.02e-08;5!UBERON:0001130;4.02e-08;5!UBERON:0001066;4.02e-08;5!UBERON:0001468;4.02e-08;5!UBERON:0000075;9.03e-08;16!UBERON:0002073;1.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.56e-13,99;UBERON:0001737,2.80e-12,9;UBERON:0004905,2.78e-09,8;UBERON:0000982,2.78e-09,8;UBERON:0004770,2.78e-09,8;UBERON:0011135,3.72e-08,5;UBERON:0002216,3.72e-08,5;UBERON:0011134,3.72e-08,5;UBERON:0002209,3.72e-08,5;UBERON:0002213,3.72e-08,5;UBERON:0005856,3.72e-08,5;UBERON:0005866,3.72e-08,5;UBERON:0005863,3.72e-08,5;UBERON:0007844,3.72e-08,5;UBERON:0011138,3.72e-08,5;UBERON:0001130,3.72e-08,5;UBERON:0001066,3.72e-08,5;UBERON:0001468,3.72e-08,5;UBERON:0000075,7.76e-08,16;UBERON:0002073,1.52e-07,5;UBERON:0005086,1.52e-07,5;UBERON:0001557,1.55e-07,19;UBERON:0000165,2.29e-07,29;UBERON:0000930,2.29e-07,29;UBERON:0000161,4.19e-07,36;UBERON:0001007,8.51e-07,145;UBERON:0001555,8.51e-07,145;UBERON:0007026,8.51e-07,145 | |||
|phase1_expression=2.72517568905835,2.5692062866918,0.563817616383885,0,2.23480547213644,1.74467704820074,0,0.631719873426831,18.2829939739887,0,0.697801167972428,0,0.263766978228454,19.4313174147273,18.5582530407633,0.672325146451775,0,1.46062018077475,0.487932798790507,0.492484232307152,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,1.83884244895785,0,0.369754010166788,0,0,0,0,0,0,1.34349284543955,0,1.28787783817093,0,0,0.242584061187816,0,0,0,0.575384784644301,0.512321413058201,0.709446689665756,0,0,0,0,0,0.224723484445085,0.306083892370903,0.320929027076094,0.639337125799041,0.659702600373432,0.997318288108159,0,0.290209238628584,0,0,1.50749199154046,0.521482918420201,0.217188844705117,0,0,0,0.211255286311942,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,2.50668955317945,2.02785126545153,0,0.973269740605272,0,0,0,0.130979075497713,3.64295288292542,0.741568885568859,0,0,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0.838998872419812,0,0,0,0,0,0,2.28081631715554,1.46437234528902,0,0,0,0,0,0,0,0,0,0,2.18047026071267,1.49091585508596,0.25326102332916,1.98613771219828,2.29469296599051,0,5.04609840128076,0,0.24666754841716,1.24484414159907,0,0.163461903113459,0.151357427644931,0.576175924479999,1.40592859100278,2.49728061464256,0,1.64393548606981,0.117434498643765,0.809364721840658,0.421352420106746,3.0623125688234,4.54486974053541,6.09622108937016,3.56400857184616,0.989067717114227,2.73048408581408,1.43723628363248,1.5150250255866,1.25118519871964,1.38532057742091,0.438977620880838,1.83892677479412,2.10333282469236,0.113432183160021,0.179389635688862,4.69826255400848,1.69545520927649,0.300091096084402,1.54578793857658,3.09168648054755,1.67505170698431,0,0.194874010322397,0,4.69454483075727,14.8714372273307,0.355009592516614,0.201504196455281,1.3564847384839,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,7.8224766164908,10.935095949279,12.4321429217232,3.71494342425583,3.60939740834793,6.03364680203204,5.05754070234305,3.61516544825223,6.06616850028167,6.972142210957,5.21995362044413,7.14605933248871,7.2601942096378,7.31019598198142,0,0,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.925884451585296,3.58389135841357,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0.297262324577456,0,0.16798212819886,0.992425680696705,0.358234090811393,0.290633938513962,0.766765358330422,0,0,0,0,0,0.380987365753014,4.20187268114105,0,5.13217338068116,0.308482478109971,0,4.85904935471983,0,0,0,0,28.6125156681506,0,0.531876233169741,0,0.514414748524284,0,0.799266537048298,0.714889968290738,5.42621605391443,0,0,1.42156779497018,1.58390374586686,0.602878754119172,0,0,0,0.502257091432126,0,0,2.29723871668228,5.70547620162874,2.60606352001643,0.61642896765115,3.40215830155802,0,0,0,0,0,0,0,0,0,0,0,0,7.85225547002495,7.50255781589516,7.5954206635926,2.9115920614313,4.10386674233472,7.09660867652706,3.27995961979597,1.50473049863859,0,5.17365356462525,0,0.553107505625109,4.25729710893606,21.3423261634387,5.14715135716284,0,0,0,1.5156378572313,1.66435439510497,0.907170879989041,0.744323423456331,0.460385919864187,0.561320188866147,1.79394808957981,0.511707249066704,0.160853921143607,4.45254199334973,0,0.355123450626254,4.59912073677331,1.03850885836724,2.20799719073923,0,0,2.30202472339741,2.06666006696292,1.27463817604702,6.29397191805236,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,36.5415315144221,1.07834031980251,0.307007349452259,0.689182862422653,1.07420244868274,2.32026710262766,1.10794615640931,2.75999310504886,0.330569830721956,0.576570202095319,0.255225424989168,0.30347334256665,0.464845549297286,0.94443704049192,0.6970372701606,0.616067160352178,1.59691809095107,0.869932992075073,0.18532421910392,0.143124886741991,0,1.89827654831236,0.190630193923825,0.767693373934002,2.1396949401696,8.59148769400029,0,0.899362287916574,1.09814811894422,0.706874414074119,0.202182481573316,0,0.421258456238981,0.48763373908959,7.06769119930725,0,2.04749867111979,4.10075752665767,0,2.2054613741845,1.32687795048244,5.26141062304515,4.05142873986681,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,23.2218398827431,17.4526293268748,2.27683904259429,4.54915136318478,0.48111056362756,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0.5745161103971,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0.23874448473769,1.18785872333055,0,0,0,0.222617410045812,0,0,0.398495976502139,0.276283915531148,0,0,0,0.311039587661807,0.359473404589307,0.537063524026827,0.511572370226872,0.197286811273867,0,5.55684950723184,0,0,0,0,3.76077999983642,0.724999575434793,0.341380344856499,0,0.236387681767936,0.344743373241465,0,0.868124974666461,0,0,0,0.221158519862449,0,0,1.198323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| |||
|short_description=p3@SECTM1 | |||
}} |
Latest revision as of 12:28, 18 September 2015
Short description: | p3@SECTM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SECTM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 74bp_to_ENST00000269389, NM_003004, uc002keo.2, uc002kep.2_5end |
EntrezGene: | SECTM1 |
HGNC: | 10707 |
UniProt: | Q8WVN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.81e-11 | 76 |
hair follicle cell | 1.52e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
surface structure | 9.56e-13 | 99 |
larynx | 2.80e-12 | 9 |
articulation | 2.78e-09 | 8 |
skeletal joint | 2.78e-09 | 8 |
articular system | 2.78e-09 | 8 |
intervertebral cartilage | 3.72e-08 | 5 |
symphysis | 3.72e-08 | 5 |
nonsynovial joint | 3.72e-08 | 5 |
fibrous joint | 3.72e-08 | 5 |
cartilaginous joint | 3.72e-08 | 5 |
developing mesenchymal condensation | 3.72e-08 | 5 |
pre-cartilage condensation | 3.72e-08 | 5 |
cartilaginous condensation | 3.72e-08 | 5 |
cartilage element | 3.72e-08 | 5 |
post-cranial axial skeletal system | 3.72e-08 | 5 |
vertebral column | 3.72e-08 | 5 |
intervertebral disk | 3.72e-08 | 5 |
intervertebral joint | 3.72e-08 | 5 |
subdivision of skeletal system | 7.76e-08 | 16 |
hair follicle | 1.52e-07 | 5 |
hair follicle placode | 1.52e-07 | 5 |
upper respiratory tract | 1.55e-07 | 19 |
mouth | 2.29e-07 | 29 |
stomodeum | 2.29e-07 | 29 |
orifice | 4.19e-07 | 36 |
digestive system | 8.51e-07 | 145 |
digestive tract | 8.51e-07 | 145 |
primitive gut | 8.51e-07 | 145 |