FFCP PHASE2:Hg19::chr8:55370884..55370896,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:64321 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:18122 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=64321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18122 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 12:40, 18 September 2015
Short description: | p5@SOX17 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SOX17_5end |
Coexpression cluster: | NA |
Association with transcript: | 187bp_to_BC140307_5end |
EntrezGene: | SOX17 |
HGNC: | 18122 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@SOX17 |
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5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 2.13e-15 | 121 |
vascular associated smooth muscle cell | 4.87e-14 | 32 |
capillary endothelial cell | 6.12e-14 | 3 |
endothelial cell of vascular tree | 6.51e-14 | 24 |
blood vessel endothelial cell | 2.97e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.97e-13 | 18 |
endothelial cell | 2.57e-12 | 36 |
smooth muscle cell of the pulmonary artery | 5.05e-11 | 1 |
androgen binding protein secreting cell | 8.22e-11 | 1 |
seminiferous tubule epithelial cell | 8.22e-11 | 1 |
Showing 1 to 10 of 26 entries
Ontology term | p-value | n |
---|---|---|
vessel | 1.06e-21 | 68 |
epithelial tube open at both ends | 1.56e-21 | 59 |
blood vessel | 1.56e-21 | 59 |
blood vasculature | 1.56e-21 | 59 |
vascular cord | 1.56e-21 | 59 |
epithelium of gonad | 1.55e-19 | 2 |
vasculature | 1.17e-18 | 78 |
vascular system | 1.17e-18 | 78 |
splanchnic layer of lateral plate mesoderm | 1.92e-17 | 83 |
artery | 2.59e-17 | 42 |
Showing 1 to 10 of 52 entries
Ontology term | p-value | n |
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ovary epithelial cancer | 1.77e-10 | 1 |
Showing 1 to 1 of 1 entries