FFCP PHASE1:Hg19::chr1:53378788..53378797,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55268 | |EntrezGene=55268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23408 | |HGNC=23408 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=218bp_to_ENST00000493896_5end | |association_with_transcript=218bp_to_ENST00000493896_5end | ||
|cluster_id=chr1:53378788..53378797,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_11_at_ECHDC2_5end | |description=CAGE_peak_11_at_ECHDC2_5end | ||
|id=chr1:53378788..53378797,- | |id=chr1:53378788..53378797,- | ||
|ontology_enrichment_celltype=CL:0000182;1.85e-17;12 | |ontology_enrichment_celltype=CL:0000181!1.85e-10!12;CL:0000417!1.85e-10!12;CL:0000668!1.85e-10!12;CL:0000414!1.85e-10!12;CL:0000412!1.85e-10!12;CL:0000182!1.85e-10!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;1.85e-17;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.85e-17,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002107;1.91e-11;19!UBERON:0006925;1.91e-11;19!UBERON:0002423;5.95e-09;25!UBERON:0002365;1.25e-07;31!UBERON:0002330;1.25e-07;31!UBERON:0002368;3.81e-07;33 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.96e-14!19;UBERON:0006925!3.96e-14!19;UBERON:0008836!3.96e-14!19;UBERON:0008835!2.64e-12!22;UBERON:0003894!2.64e-12!22;UBERON:0009854!8.40e-12!23;UBERON:0007499!6.47e-11!25;UBERON:0009497!6.47e-11!25;UBERON:0000015!6.47e-11!25;UBERON:0002423!6.47e-11!25;UBERON:0006235!6.47e-11!25;UBERON:0004161!6.47e-11!25;UBERON:0005057!1.60e-10!26;UBERON:0009856!1.60e-10!26;UBERON:0002365!6.17e-09!31;UBERON:0002330!6.17e-09!31;UBERON:0002368!5.46e-08!35;UBERON:0001872!6.77e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.91e-11;19!UBERON:0006925;1.91e-11;19!UBERON:0002423;5.95e-09;25!UBERON:0002365;1.25e-07;31!UBERON:0002330;1.25e-07;31!UBERON:0002368;3.81e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.91e-11,19;UBERON:0006925,1.91e-11,19;UBERON:0008836,1.91e-11,19;UBERON:0008835,4.96e-10,22;UBERON:0003894,4.96e-10,22;UBERON:0009854,1.22e-09,23;UBERON:0007499,5.95e-09,25;UBERON:0009497,5.95e-09,25;UBERON:0000015,5.95e-09,25;UBERON:0002423,5.95e-09,25;UBERON:0006235,5.95e-09,25;UBERON:0004161,5.95e-09,25;UBERON:0009856,1.20e-08,26;UBERON:0002365,2.05e-07,31;UBERON:0002330,2.05e-07,31 | |||
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|short_description=p11@ECHDC2 | |short_description=p11@ECHDC2 | ||
}} | }} |
Latest revision as of 13:21, 18 September 2015
Short description: | p11@ECHDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ECHDC2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 218bp_to_ENST00000493896_5end |
EntrezGene: | ECHDC2 |
HGNC: | 23408 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.85e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.91e-11 | 19 |
digestive gland | 1.91e-11 | 19 |
liver bud | 1.91e-11 | 19 |
hepatic diverticulum | 4.96e-10 | 22 |
liver primordium | 4.96e-10 | 22 |
digestive tract diverticulum | 1.22e-09 | 23 |
epithelial sac | 5.95e-09 | 25 |
epithelium of foregut-midgut junction | 5.95e-09 | 25 |
anatomical boundary | 5.95e-09 | 25 |
hepatobiliary system | 5.95e-09 | 25 |
foregut-midgut junction | 5.95e-09 | 25 |
septum transversum | 5.95e-09 | 25 |
sac | 1.20e-08 | 26 |
exocrine gland | 2.05e-07 | 31 |
exocrine system | 2.05e-07 | 31 |