FFCP PHASE1:Hg19::chr2:79347606..79347622,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5967 | |EntrezGene=5967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9951 | |HGNC=9951 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000461579_5end | |association_with_transcript=0bp_to_ENST00000461579_5end | ||
|cluster_id=chr2:79347606..79347622,+ | |||
|coexpression_cluster_id=C27 | |coexpression_cluster_id=C27 | ||
|description=CAGE_peak_1_at_REG1A_5end | |description=CAGE_peak_1_at_REG1A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.60e-09;1!UBERON:0001045;3.44e-09;1!UBERON:0006242;6.99e-09;1 | |ontology_enrichment_development_v019=UBERON:0000358;2.60e-09;1!UBERON:0001045;3.44e-09;1!UBERON:0006242;6.99e-09;1 | ||
|ontology_enrichment_disease=DOID:114!3.37e-09!2 | |ontology_enrichment_disease=DOID:114!3.37e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:114;5.55e-16;2!DOID:178;5.53e-09;1!DOID:326;5.53e-09;1!DOID:3978;5.53e-09;1!DOID:3394;5.53e-09;1!DOID:5844;5.53e-09;1!DOID:1287;1.91e-08;4 | |ontology_enrichment_disease_v019=DOID:114;5.55e-16;2!DOID:178;5.53e-09;1!DOID:326;5.53e-09;1!DOID:3978;5.53e-09;1!DOID:3394;5.53e-09;1!DOID:5844;5.53e-09;1!DOID:1287;1.91e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,5.99e-16,2;DOID:178,5.31e-09,1;DOID:326,5.31e-09,1;DOID:3978,5.31e-09,1;DOID:3394,5.31e-09,1;DOID:5844,5.31e-09,1;DOID:1287,1.98e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.16e-20!115;UBERON:0005409!8.70e-12!35;UBERON:0000160!1.77e-08!27;UBERON:0002108!7.26e-07!14 | |ontology_enrichment_uberon=UBERON:0007023!4.16e-20!115;UBERON:0005409!8.70e-12!35;UBERON:0000160!1.77e-08!27;UBERON:0002108!7.26e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.90e-16;22!UBERON:0000160;2.44e-15;17!UBERON:0002108;8.14e-15;4!UBERON:0004921;2.09e-09;33!UBERON:0001154;3.44e-09;1!UBERON:0001153;3.44e-09;1!UBERON:0009854;3.44e-09;1!UBERON:0007029;3.88e-09;1!UBERON:0001155;1.78e-08;9!UBERON:0000059;5.15e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0005409;4.90e-16;22!UBERON:0000160;2.44e-15;17!UBERON:0002108;8.14e-15;4!UBERON:0004921;2.09e-09;33!UBERON:0001154;3.44e-09;1!UBERON:0001153;3.44e-09;1!UBERON:0009854;3.44e-09;1!UBERON:0007029;3.88e-09;1!UBERON:0001155;1.78e-08;9!UBERON:0000059;5.15e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.44e-15,17;UBERON:0002108,7.95e-15,4;UBERON:0005409,4.28e-14,25;UBERON:0001154,3.58e-09,1;UBERON:0001153,3.58e-09,1;UBERON:0001045,3.58e-09,1;UBERON:0007029,3.88e-09,1;UBERON:0001155,1.80e-08,9;UBERON:0000059,5.20e-07,11 | |||
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| ||
|short_description=p1@REG1A | |short_description=p1@REG1A | ||
}} | }} |
Latest revision as of 13:47, 18 September 2015
Short description: | p1@REG1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_REG1A_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 0bp_to_ENST00000461579_5end |
EntrezGene: | REG1A |
HGNC: | 9951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.44e-15 | 17 |
small intestine | 7.95e-15 | 4 |
gastrointestinal system | 4.28e-14 | 25 |
vermiform appendix | 3.58e-09 | 1 |
caecum | 3.58e-09 | 1 |
midgut | 3.58e-09 | 1 |
surface | 3.88e-09 | 1 |
colon | 1.80e-08 | 9 |
large intestine | 5.20e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.99e-16 | 2 |
vascular disease | 5.31e-09 | 1 |
ischemia | 5.31e-09 | 1 |
extrinsic cardiomyopathy | 5.31e-09 | 1 |
myocardial ischemia | 5.31e-09 | 1 |
myocardial infarction | 5.31e-09 | 1 |
cardiovascular system disease | 1.98e-08 | 4 |