FFCP PHASE1:Hg19::chr11:60609855..60609874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79080 | |EntrezGene=79080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28359 | |HGNC=28359 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=237bp_to_uc001nqb.2_5end | |association_with_transcript=237bp_to_uc001nqb.2_5end | ||
|cluster_id=chr11:60609855..60609874,+ | |||
|description=CAGE_peak_5_at_CCDC86_5end | |description=CAGE_peak_5_at_CCDC86_5end | ||
|id=chr11:60609855..60609874,+ | |id=chr11:60609855..60609874,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000307;5.26e-12;3!CL:0000511;1.25e-09;1!CL:0002625;1.25e-09;1!CL:0000216;1.25e-09;1!CL:0002188;1.50e-07;5 | |ontology_enrichment_celltype_v019=CL:0000307;5.26e-12;3!CL:0000511;1.25e-09;1!CL:0002625;1.25e-09;1!CL:0000216;1.25e-09;1!CL:0002188;1.50e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.23e-12,3;CL:0000069,6.23e-12,3;CL:0000307,6.23e-12,3;CL:0000377,6.23e-12,3;CL:0000511,7.50e-10,1;CL:0002625,7.50e-10,1;CL:0000216,7.50e-10,1;CL:0002188,1.36e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;5.26e-12;3 | |ontology_enrichment_development_v019=CL:0000377;5.26e-12;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.63e-10;8!UBERON:0001136;1.25e-09;1!UBERON:0001343;1.25e-09;1!UBERON:0004910;1.25e-09;1!UBERON:0004813;1.25e-09;1!UBERON:0003135;1.91e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0000473;4.63e-10;8!UBERON:0001136;1.25e-09;1!UBERON:0001343;1.25e-09;1!UBERON:0004910;1.25e-09;1!UBERON:0004813;1.25e-09;1!UBERON:0003135;1.91e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.50e-10,8;UBERON:0001136,7.50e-10,1;UBERON:0001343,7.50e-10,1;UBERON:0004910,7.50e-10,1;UBERON:0005154,7.50e-10,1;UBERON:0005295,7.50e-10,1;UBERON:0004813,7.50e-10,1;UBERON:0005297,7.50e-10,1;UBERON:0005294,7.50e-10,1;UBERON:0010141,7.50e-10,1;UBERON:0005891,7.50e-10,1;UBERON:0003135,1.87e-07,11;UBERON:0004876,2.09e-07,11 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0,0,0,0,0,1.26343974685366,0.261185628199839,0.491467873003018,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0.286235987131057,0,0.125542639594803,0.152826811495903,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,1.24930726552346,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0,0.196468613246569,0.364295288292542,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0.596287222100115,0,0,1.69592382577203,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0.267899184852239,0.22452937262617,0,0,0.949265659568129,0.732806975721629,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.326923806226917,0.454072282934794,0,0.234321431833797,0.936480230490962,0.570471821544449,0.747243402759005,0.23486899728753,0.485618833104395,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,0,0,0.673344455816265,0.125118519871964,0,0,0,0.45071417671979,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0.272746120590835,0.573609190778008,0,0.132529768321485,0,0,0,0.72995471815166,0,0,1.38134921352481,0,0,0.118306800039844,0,0.723033089650446,0.441175890929576,0.435758888184812,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0,0.439001141634502,1.1240175325762,0.301586917234893,0.277765335475589,0.325808305310325,0,0,0,0.117408694235822,0.433099343283221,0.925971025153221,0.570762456703795,0,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0.503946384596579,0,0.0895585227028483,0,0.383382679165211,0,0,0.207328115540772,0.288239906833923,0.50496973370552,0,0.763976851116555,0,1.71072446022705,0.205654985406647,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0.51336800074665,0,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0.197030760201927,0,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.260650843404249,0.391602314925481,0.343143423810856,0,0,0.320182673410333,0,0,0,0.496215615637554,0,0.280660094433074,0,0,0,0,0,0.532685175939381,0.0821271560138091,0,0.348631135379878,2.05461064305758,0,0.460404944679482,0.114814448164607,0.546273504020151,0.131124414959424,0.451199612907412,0.385076685522074,0,0,0,1.13733384070897,0,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0.183138929636687,0.082509499920588,0.574265537996172,0,1.6068392984416,0.48335359146061,0,0.460511024178389,0.275673144969061,0.429680979473094,0.290033387828457,0.340906509664404,0,0.330569830721956,0.192190067365106,0,0.2023155617111,1.39453664789186,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,0.699869440489966,0,1.34060455107157,1.08890984861323,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0,0.142283686696828,0,0.399158742865633,0,0,0,0,0,0.783399478865116,2.50634477090067,0,0,0,0,0.687010689511529,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0.593929361665277,0,0,0,0.111308705022906,0,0,0,0,0.503865495708552,0.20453736500431,0.123084805461069,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0.227586896570999,0,0.236387681767936,0,0.291604613383254,0,0,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0.108647371922008,0,0.183195186803725,0,2.04386596391473,0,0.166211681900156,0,0,0,0,0,0.421996129056054,0,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0.370691816839509,0.313265848516366,0.134802265961354,0,0,0,0,0.2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| ||
|short_description=p5@CCDC86 | |short_description=p5@CCDC86 | ||
}} | }} |
Latest revision as of 14:06, 18 September 2015
Short description: | p5@CCDC86 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCDC86_5end |
Coexpression cluster: | NA |
Association with transcript: | 237bp_to_uc001nqb.2_5end |
EntrezGene: | CCDC86 |
HGNC: | 28359 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.23e-12 | 3 |
branched duct epithelial cell | 6.23e-12 | 3 |
tracheal epithelial cell | 6.23e-12 | 3 |
tracheoblast | 6.23e-12 | 3 |
androgen binding protein secreting cell | 7.50e-10 | 1 |
seminiferous tubule epithelial cell | 7.50e-10 | 1 |
Sertoli cell | 7.50e-10 | 1 |
glomerular endothelial cell | 1.36e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 4.50e-10 | 8 |
mesothelium | 7.50e-10 | 1 |
seminiferous tubule of testis | 7.50e-10 | 1 |
epithelium of male gonad | 7.50e-10 | 1 |
epithelial cord | 7.50e-10 | 1 |
sex cord | 7.50e-10 | 1 |
seminiferous tubule epithelium | 7.50e-10 | 1 |
testis sex cord | 7.50e-10 | 1 |
genital ridge | 7.50e-10 | 1 |
primitive sex cord of indifferent gonad | 7.50e-10 | 1 |
coelomic epithelium | 7.50e-10 | 1 |
male reproductive organ | 1.87e-07 | 11 |
urogenital ridge | 2.09e-07 | 11 |