FFCP PHASE1:Hg19::chr3:48520693..48520700,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51246 | |EntrezGene=51246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30376 | |HGNC=30376 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=267bp_to_ENST00000486344,uc011bbl.1_5end | |association_with_transcript=267bp_to_ENST00000486344,uc011bbl.1_5end | ||
|cluster_id=chr3:48520693..48520700,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_27_at_SHISA5_5end | |description=CAGE_peak_27_at_SHISA5_5end | ||
|id=chr3:48520693..48520700,- | |id=chr3:48520693..48520700,- | ||
|ontology_enrichment_celltype=CL:0000838!4.63e-21!52;CL:0000542!1.33e-20!53;CL:0000051!1.33e-20!53;CL:0000791!1.49e-14!18;CL:0000789!1.49e-14!18;CL:0002420!1.49e-14!18;CL:0002419!1.49e-14!18;CL:0000790!1.49e-14!18;CL:0000084!3.32e-13!25;CL:0000827!3.32e-13!25;CL:0000815!2.10e-12!2;CL:0000792!2.10e-12!2;CL:0002677!2.10e-12!2;CL:0000738!5.29e-09!140;CL:0000624!5.63e-09!6;CL:0000898!1.49e-08!3;CL:0000767!1.93e-08!3;CL:0000039!4.49e-08!7;CL:0000586!4.49e-08!7;CL:0000945!6.54e-08!24;CL:0000826!6.54e-08!24;CL:0002087!2.24e-07!119;CL:0002127!3.17e-07!1;CL:0000914!3.17e-07!1;CL:0000911!3.17e-07!1;CL:0000814!3.17e-07!1;CL:0002042!3.17e-07!1;CL:0002039!3.17e-07!1;CL:0002040!3.17e-07!1;CL:0002041!3.17e-07!1;CL:0002032!4.30e-07!165;CL:0000837!4.30e-07!165;CL:0002031!5.80e-07!124;CL:0000819!6.38e-07!1;CL:0000094!7.42e-07!8;CL:0000236!8.83e-07!14 | |ontology_enrichment_celltype=CL:0000838!4.63e-21!52;CL:0000542!1.33e-20!53;CL:0000051!1.33e-20!53;CL:0000791!1.49e-14!18;CL:0000789!1.49e-14!18;CL:0002420!1.49e-14!18;CL:0002419!1.49e-14!18;CL:0000790!1.49e-14!18;CL:0000084!3.32e-13!25;CL:0000827!3.32e-13!25;CL:0000815!2.10e-12!2;CL:0000792!2.10e-12!2;CL:0002677!2.10e-12!2;CL:0000738!5.29e-09!140;CL:0000624!5.63e-09!6;CL:0000898!1.49e-08!3;CL:0000767!1.93e-08!3;CL:0000039!4.49e-08!7;CL:0000586!4.49e-08!7;CL:0000945!6.54e-08!24;CL:0000826!6.54e-08!24;CL:0002087!2.24e-07!119;CL:0002127!3.17e-07!1;CL:0000914!3.17e-07!1;CL:0000911!3.17e-07!1;CL:0000814!3.17e-07!1;CL:0002042!3.17e-07!1;CL:0002039!3.17e-07!1;CL:0002040!3.17e-07!1;CL:0002041!3.17e-07!1;CL:0002032!4.30e-07!165;CL:0000837!4.30e-07!165;CL:0002031!5.80e-07!124;CL:0000819!6.38e-07!1;CL:0000094!7.42e-07!8;CL:0000236!8.83e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.16e-29;7!CL:0000586;3.16e-29;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.74e-29,7;CL:0000586,2.74e-29,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.72e-21;10!UBERON:0005564;7.72e-21;10 | |||
|ontology_enrichment_disease=DOID:0060073!6.38e-07!1;DOID:8675!6.38e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.33e-10;22!DOID:2994;4.33e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.14e-10,22;DOID:2994,4.14e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.15e-07!7;UBERON:0000473!4.09e-07!8 | |ontology_enrichment_uberon=UBERON:0004177!1.15e-07!7;UBERON:0000473!4.09e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.81e-26;8!UBERON:0003135;4.69e-19;11!UBERON:0000991;1.61e-10;21!UBERON:0003101;4.33e-10;22!UBERON:0000079;4.33e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22 | |||
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|short_description=p27@SHISA5 | |short_description=p27@SHISA5 | ||
}} | }} |
Latest revision as of 14:19, 18 September 2015
Short description: | p27@SHISA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_SHISA5_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 267bp_to_ENST00000486344, uc011bbl.1_5end |
EntrezGene: | SHISA5 |
HGNC: | 30376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.74e-29 | 7 |
germ cell | 2.74e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.14e-10 | 22 |
germ cell cancer | 4.14e-10 | 22 |