FFCP PHASE1:Hg19::chr11:60720032..60720060,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51296 | |EntrezGene=51296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18068 | |HGNC=18068 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZ36 | |UniProt=F5GZ36 | ||
|association_with_transcript=-30bp_to_ENST00000538739_5end | |association_with_transcript=-30bp_to_ENST00000538739_5end | ||
|cluster_id=chr11:60720032..60720060,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_SLC15A3_5end | |description=CAGE_peak_2_at_SLC15A3_5end | ||
|id=chr11:60720032..60720060,- | |id=chr11:60720032..60720060,- | ||
|ontology_enrichment_celltype=CL:0002057!1.94e-11!42;CL:0000766!8.28e-11!76;CL:0000860!8.74e-10!45;CL:0000048!8.78e-09!430;CL:0000723!1.50e-08!436;CL:0000738!6.60e-08!140;CL:0000034!7.97e-08!444;CL:0002320!1.46e-07!365;CL:0000134!3.16e-07!358;CL:0000839!8.86e-07!70 | |ontology_enrichment_celltype=CL:0002057!1.94e-11!42;CL:0000766!8.28e-11!76;CL:0000860!8.74e-10!45;CL:0000048!8.78e-09!430;CL:0000723!1.50e-08!436;CL:0000738!6.60e-08!140;CL:0000034!7.97e-08!444;CL:0002320!1.46e-07!365;CL:0000134!3.16e-07!358;CL:0000839!8.86e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.93e-10;8!CL:0000081;1.72e-08;11!CL:0002393;4.99e-08;6!CL:0002397;4.99e-08;6!CL:0000766;2.28e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.87e-13,72;CL:0000860,1.14e-10,42;CL:0002057,1.14e-10,42;CL:0000738,2.31e-10,136;CL:0000094,2.65e-10,8;CL:0000473,1.78e-09,48;CL:0000234,1.78e-09,48;CL:0000081,2.01e-08,11;CL:0002393,2.48e-08,9;CL:0002397,2.48e-08,9;CL:0000839,1.35e-07,66;CL:0000557,2.27e-07,67;CL:0000134,2.28e-07,354;CL:0002320,4.36e-07,361;CL:0002194,9.32e-07,59;CL:0000576,9.32e-07,59;CL:0000040,9.32e-07,59;CL:0000559,9.32e-07,59;CL:0002087,9.61e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;4.36e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.01e-08!167;UBERON:0002193!2.11e-08!112;UBERON:0002384!5.68e-08!375;UBERON:0002390!8.25e-08!102;UBERON:0003061!8.25e-08!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.07e-09,98;UBERON:0003061,1.07e-09,98;UBERON:0002193,2.27e-08,108;UBERON:0002371,3.87e-08,76;UBERON:0002384,1.19e-07,371;UBERON:0001474,1.94e-07,82 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.563817616383885,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0.218441372130172,0,0.74259811776028,0.331397375727916,0,0,0.730310090387373,0,0.246242116153576,0,0.313454721478088,0.286235987131057,0.273748850145768,0.251085279189606,2.21598876669059,1.72411237844886,1.96776953284198,1.57345710739562,1.15148819429164,1.39334510984468,0.919421224478927,0.6024118375565,1.10926203050036,0.309868802321207,0.142169232487422,0,6.64794490238253,6.21687787157439,4.99125002646459,0.223915474239924,0.971680998056939,0.257575567634187,0.436194716338694,1.13362783106643,0.485168122375632,2.09186133215116,0.822335776043652,1.85823822537062,1.43846196161075,0.768482119587302,0.709446689665756,1.72372840368309,1.29096936716765,1.35426486594342,1.31769637679823,0.545812300115692,0.898893937780338,1.22433556948361,0.641858054152187,0.639337125799041,0.659702600373432,0.199463657621632,0,4.35313857942876,1.70215567407342,2.4912889959823,0,0.521482918420201,0.217188844705117,0.605399502633369,1.47311054395026,1.89877432464531,1.47878700418359,3.18906449947565,1.04829322754188,1.12328631146495,1.05123824989054,1.6072558669708,3.42015292489498,1.19350006319454,0.91332076882317,1.75996244461323,0.546138611262131,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0,2.16380747125216,1.17903228824749,0.822405995998037,0,0.651844533267181,0,0,0,0,0,0,0,0,0.164437904603676,0,0,1.4828656316206,0.535081656179426,4.18142095219907,0,0,0,0,0.637130828648193,0,0.950452044448374,0.903450714466637,0.895906278080929,2.49861453104692,0.473554504088034,0,2.01606743224732,0.267440195783507,2.46201486600758,0,0.670700859703636,0.511450247374121,2.1686349143074,0.50133791063589,1.88300474649071,0,1.94653948121054,0,0,0,0.654895377488563,2.18577172975525,1.11235332835329,0,1.0447784237956,0.398873881556595,0,0,0,0.596287222100115,0,0,0.56530794192401,0.838998872419812,0,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,0.976248230192678,0.735326160691737,0,0.803697554556718,1.12264686313085,0.900891843866578,0,0,0,15.8136500923276,34.9002237733493,0,0,0.379891534993739,1.19168262731897,1.14734648299525,0.354668382198357,0,0,0.49333509683432,0,0.942974704487816,0.490385709340376,0.908144565869588,0,0.234321431833797,0,0.570471821544449,0.149448680551801,0.23486899728753,0.323745888736263,0,0.204154171254893,0.245668634623536,1.65321249881225,0,3.4617370098998,0.910161361938026,0.718618141816238,0,0.250237039743928,0.277064115484183,0.877955241761676,1.22595118319608,1.05166641234618,0.113432183160021,1.79389635688862,1.49490172172997,0.635795703478686,0.600182192168805,1.23663035086127,3.34932702059318,1.11670113798954,1.35021065793013,0.974370051611986,3.5340728394176,1.38074847963449,1.2931684545505,1.06502877754984,0.302256294682921,0.847802961552438,0.966304265816484,0.545492241181669,0.860413786167011,0.243947412259191,0.265059536642971,0.232387885739037,0.207322110030741,0,0,3.12899064659632,1.92972281457866,1.38134921352481,1.85747171212792,4.33127689001751,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,1.2347220339942,1.47008711385542,0,0,0,0,0,0,0.109750285408626,4.49607013030478,0.502644862058154,0,0,0,0,0,0,0.577465791044295,0,0.570762456703795,0,0,0.492434012174795,0,0.297262324577456,0.93733833986777,0.16798212819886,0.992425680696705,0.179117045405697,0,0,0,0.792435906119034,2.69526550203004,2.73827911492227,4.67097003677606,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0.258543431515556,17.8828222925941,0.845302752556,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0.542621605391443,0.823240336780769,0,0.355391948742546,0.791951872933429,0.602878754119172,0,0.599837947092342,0,2.51128545716063,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.410952645100767,1.25342674267927,0,0.985153801009636,0.215627574859517,0.641715181398742,0,0,0,0,0,23.9682247663098,14.9580729602012,21.1351911852378,0.24538298343828,0,0.542530047399471,1.66376689224646,1.07057393278297,1.10391690523754,2.10854546986884,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.60818530127658,0.979005787313703,1.02943027143257,1.6541442089831,6.03999762292127,2.881644060693,0.303127571446259,0,0,0.496215615637554,0.61384789315225,0.841980283299221,0.768834895534206,0,0.482561763430822,0,0.616838775210622,0.177561725313127,0.739144404124282,1.55776328755086,0.348631135379878,0,0,0,0.34444334449382,0.728364672026868,0.917870904715969,0,0,0,0,0,0,0.340187410553031,0,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,2.29706215198469,0,0,0.580024309752732,0.462145851343933,0.15350367472613,0.137836572484531,0.537101224341368,0.290033387828457,0.0852266274161009,0.356128142586949,0.165284915360978,0.384380134730212,0.893288987462089,0.50578890427775,0.929691098594572,0.31481234683064,1.3940745403212,1.54016790088044,1.06461206063404,0.869932992075073,0.55597265731176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| ||
|short_description=p2@SLC15A3 | |short_description=p2@SLC15A3 | ||
}} | }} |
Latest revision as of 14:46, 18 September 2015
Short description: | p2@SLC15A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC15A3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -30bp_to_ENST00000538739_5end |
EntrezGene: | SLC15A3 |
HGNC: | 18068 |
UniProt: | F5GZ36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.87e-13 | 72 |
classical monocyte | 1.14e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-10 | 42 |
leukocyte | 2.31e-10 | 136 |
granulocyte | 2.65e-10 | 8 |
defensive cell | 1.78e-09 | 48 |
phagocyte | 1.78e-09 | 48 |
blood cell | 2.01e-08 | 11 |
intermediate monocyte | 2.48e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.48e-08 | 9 |
myeloid lineage restricted progenitor cell | 1.35e-07 | 66 |
granulocyte monocyte progenitor cell | 2.27e-07 | 67 |
mesenchymal cell | 2.28e-07 | 354 |
connective tissue cell | 4.36e-07 | 361 |
monopoietic cell | 9.32e-07 | 59 |
monocyte | 9.32e-07 | 59 |
monoblast | 9.32e-07 | 59 |
promonocyte | 9.32e-07 | 59 |
nongranular leukocyte | 9.61e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.07e-09 | 98 |
blood island | 1.07e-09 | 98 |
hemolymphoid system | 2.27e-08 | 108 |
bone marrow | 3.87e-08 | 76 |
connective tissue | 1.19e-07 | 371 |
bone element | 1.94e-07 | 82 |